BLASTX nr result

ID: Glycyrrhiza23_contig00001084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001084
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35410.1| unknown [Medicago truncatula]                          307   3e-81
gb|AFK43693.1| unknown [Medicago truncatula]                          306   3e-81
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   298   2e-78
gb|AFK40252.1| unknown [Lotus japonicus]                              296   6e-78
ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin...   295   8e-78

>gb|AFK35410.1| unknown [Medicago truncatula]
          Length = 254

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/179 (87%), Positives = 171/179 (95%)
 Frame = -1

Query: 899 MATTQLTASSISTRNLASFEGLRPSTVQFFSAGHVRIGNPSRRSFPGLIVKAATVVAPKY 720
           MA++QLTASSISTR++ASFEGLRPS+VQF SA HVRIGNP+RRSF  LIVKAATVVAPKY
Sbjct: 1   MASSQLTASSISTRSVASFEGLRPSSVQFHSARHVRIGNPARRSFKALIVKAATVVAPKY 60

Query: 719 TAIKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGKNQVEISVKT 540
           TAIKPLGDRVLVK+KEAEEKT+ GILLPS+AQ+KPQGGEVVAVGEGKT+GKNQVEISVK 
Sbjct: 61  TAIKPLGDRVLVKIKEAEEKTQSGILLPSSAQTKPQGGEVVAVGEGKTLGKNQVEISVKP 120

Query: 539 GAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKT 363
           GAQVVYSKYAGTEV+FNG KHLI+KDDDIVGILETDDIKDLKPLNDRVLIK+ +AEEKT
Sbjct: 121 GAQVVYSKYAGTEVDFNGEKHLILKDDDIVGILETDDIKDLKPLNDRVLIKIEKAEEKT 179



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = -1

Query: 713 IKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGK-NQVEISVKTG 537
           +KPL DRVL+K+++AEEKT GG+ L    + KP  G VVAVG G    + N+  ++V +G
Sbjct: 161 LKPLNDRVLIKIEKAEEKTSGGLYLTEATKEKPSFGTVVAVGPGLVDEEGNRKPLTVASG 220

Query: 536 AQVVYSKYAGTEVE-FNGSKHLIVKDDDIVGIL 441
             V+YSKYAG + +  +G +++ ++  D++ +L
Sbjct: 221 NTVLYSKYAGNDFKGKDGFEYVTLRSSDVMAVL 253


>gb|AFK43693.1| unknown [Medicago truncatula]
          Length = 254

 Score =  306 bits (785), Expect = 3e-81
 Identities = 155/179 (86%), Positives = 171/179 (95%)
 Frame = -1

Query: 899 MATTQLTASSISTRNLASFEGLRPSTVQFFSAGHVRIGNPSRRSFPGLIVKAATVVAPKY 720
           MA++QLTASSISTR++ASFEGLRPS+VQF SA HVRIGNP+RRSF  LIVKAATVVAPKY
Sbjct: 1   MASSQLTASSISTRSVASFEGLRPSSVQFHSARHVRIGNPARRSFKALIVKAATVVAPKY 60

Query: 719 TAIKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGKNQVEISVKT 540
           TAIKPLGDRVLVK+KEAEEKT+ GILLPS+AQ+KPQGGEVVAVGEGKT+GKNQVEISVK 
Sbjct: 61  TAIKPLGDRVLVKIKEAEEKTQSGILLPSSAQTKPQGGEVVAVGEGKTLGKNQVEISVKP 120

Query: 539 GAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKT 363
           GAQVVYSKYAGTEV+FNG KHL++KDDDIVGILETDDIKDLKPLNDRVLIK+ +AEEKT
Sbjct: 121 GAQVVYSKYAGTEVDFNGEKHLVLKDDDIVGILETDDIKDLKPLNDRVLIKIEKAEEKT 179



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = -1

Query: 713 IKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGK-NQVEISVKTG 537
           +KPL DRVL+K+++AEEKT GG+ L    + KP  G VVAVG G    + N+  ++V +G
Sbjct: 161 LKPLNDRVLIKIEKAEEKTSGGLYLTEATKEKPSFGTVVAVGPGLVDEEGNRKPLTVASG 220

Query: 536 AQVVYSKYAGTEVE-FNGSKHLIVKDDDIVGIL 441
             V+YSKYAG + +  +G +++ ++  D++ +L
Sbjct: 221 NTVLYSKYAGNDFKGKDGFEYITLRSSDVMAVL 253


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
           gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score =  298 bits (762), Expect = 2e-78
 Identities = 158/181 (87%), Positives = 167/181 (92%), Gaps = 2/181 (1%)
 Frame = -1

Query: 899 MATTQLTA--SSISTRNLASFEGLRPSTVQFFSAGHVRIGNPSRRSFPGLIVKAATVVAP 726
           MA+ QLTA  SSIST   ASFEGLRPS VQF S G +RIGN S+RSF GL+VKAATVVAP
Sbjct: 1   MASAQLTAIASSIST---ASFEGLRPSAVQFASTGRIRIGNLSQRSFRGLVVKAATVVAP 57

Query: 725 KYTAIKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGKNQVEISV 546
           KYTAIKPLGDRVL+K+KEAEEKTEGGILLPS AQ+KPQGGEVVAVGEGKTVGKN VEISV
Sbjct: 58  KYTAIKPLGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISV 117

Query: 545 KTGAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK 366
           KTGAQVVYSKYAGTEV+FNG+KHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK
Sbjct: 118 KTGAQVVYSKYAGTEVDFNGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK 177

Query: 365 T 363
           T
Sbjct: 178 T 178



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = -1

Query: 713 IKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGK-NQVEISVKTG 537
           +KPL DRVL+KV EAEEKT GG+LL    + KP  G V+AVG G    + N+  +SV  G
Sbjct: 160 LKPLNDRVLIKVAEAEEKTSGGLLLTEATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPG 219

Query: 536 AQVVYSKYAGTEVE-FNGSKHLIVKDDDIVGIL 441
             V+YSKYAG + +  +GS ++ ++  D++ +L
Sbjct: 220 NTVLYSKYAGNDFKGKDGSDYITLRVSDVMAVL 252


>gb|AFK40252.1| unknown [Lotus japonicus]
          Length = 252

 Score =  296 bits (757), Expect = 6e-78
 Identities = 153/179 (85%), Positives = 169/179 (94%)
 Frame = -1

Query: 899 MATTQLTASSISTRNLASFEGLRPSTVQFFSAGHVRIGNPSRRSFPGLIVKAATVVAPKY 720
           MATTQLTASSISTRN+ASFEGLRP  +QF  AG VRI NP+RRSF GL+VKAATVVAPK+
Sbjct: 1   MATTQLTASSISTRNVASFEGLRP--IQFPCAGLVRIANPTRRSFRGLLVKAATVVAPKF 58

Query: 719 TAIKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGKNQVEISVKT 540
           TAIKPLGDRVLVK+KE+EEK++GGILLP+ AQ+KPQGGEVVAVGEGKT+GK+QVEISV T
Sbjct: 59  TAIKPLGDRVLVKIKESEEKSQGGILLPTTAQTKPQGGEVVAVGEGKTIGKSQVEISVTT 118

Query: 539 GAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKT 363
           GAQVVYSKYAGTEVEFNG+KHLI+KDDDIVGILET+DIKDLKPLNDRVLIKVA AEEKT
Sbjct: 119 GAQVVYSKYAGTEVEFNGTKHLILKDDDIVGILETEDIKDLKPLNDRVLIKVAVAEEKT 177



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
 Frame = -1

Query: 713 IKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGK--TVGKNQVEISVKT 540
           +KPL DRVL+KV  AEEKT GG+LL    + KP  G V+AVG G     GK +  +++  
Sbjct: 159 LKPLNDRVLIKVAVAEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLGEEGKRK-PLAIAP 217

Query: 539 GAQVVYSKYAGTEVE-FNGSKHLIVKDDDIVGIL 441
           G  V+YSKYAG + +  +GS ++ ++  D++ IL
Sbjct: 218 GNTVLYSKYAGNDFKGKDGSDYVTLRSSDVMAIL 251


>ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max]
           gi|255645102|gb|ACU23050.1| unknown [Glycine max]
          Length = 253

 Score =  295 bits (756), Expect = 8e-78
 Identities = 156/181 (86%), Positives = 168/181 (92%), Gaps = 2/181 (1%)
 Frame = -1

Query: 899 MATTQLTA--SSISTRNLASFEGLRPSTVQFFSAGHVRIGNPSRRSFPGLIVKAATVVAP 726
           MA+ QL+A  SSIST   ASFEGLRPS VQF SAG +RIGN S+RSF GL+VKAATVVAP
Sbjct: 1   MASAQLSAISSSIST---ASFEGLRPSAVQFASAGRIRIGNLSQRSFRGLVVKAATVVAP 57

Query: 725 KYTAIKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGKNQVEISV 546
           KYTAIKPLGDRVL+K+KEAEEKTEGGILLPS AQ+KPQGGEVVAVGEGKT+GKN VEISV
Sbjct: 58  KYTAIKPLGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISV 117

Query: 545 KTGAQVVYSKYAGTEVEFNGSKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK 366
           KTGAQVVYSKYAGTEV+F+G+KHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK
Sbjct: 118 KTGAQVVYSKYAGTEVDFDGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEK 177

Query: 365 T 363
           T
Sbjct: 178 T 178



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = -1

Query: 713 IKPLGDRVLVKVKEAEEKTEGGILLPSNAQSKPQGGEVVAVGEGKTVGK-NQVEISVKTG 537
           +KPL DRVL+KV EAEEKT GG+LL    + KP  G V+AVG G    + N+  +SV  G
Sbjct: 160 LKPLNDRVLIKVAEAEEKTSGGLLLTEATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPG 219

Query: 536 AQVVYSKYAGTEVE-FNGSKHLIVKDDDIVGIL 441
             V+YSKYAG + +  +GS ++ ++  D++ +L
Sbjct: 220 NTVLYSKYAGNDFKGKDGSDYITLRVSDVMAVL 252


Top