BLASTX nr result
ID: Glycyrrhiza23_contig00001059
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00001059
(1617 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin... 631 e-178
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max] 624 e-176
ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|3... 587 e-165
gb|ACU23058.1| unknown [Glycine max] 579 e-163
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera... 512 e-142
>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
gi|255639315|gb|ACU19955.1| unknown [Glycine max]
Length = 331
Score = 631 bits (1628), Expect = e-178
Identities = 313/331 (94%), Positives = 320/331 (96%)
Frame = +1
Query: 232 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKHSSPGQAAAVSALWRENFGSSDLPPPPVF 411
MSTTVQRTPRS RQSLFFQDLASPVSARRGK SSP QAAAVS+LWRENFGSSDLPPPPVF
Sbjct: 1 MSTTVQRTPRSSRQSLFFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVF 60
Query: 412 TLEDRSDFSPESGILDYQISPETKSDNRTPIQTSNREFSTPAKSKSEASTSYALRGVQQS 591
TLEDRSDFSPESGILDYQISPETKSD RTPIQTSN+EFSTP KSKSEASTSYALRGVQQ+
Sbjct: 61 TLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGVQQN 120
Query: 592 QQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 771
QQ SPGLSWWSP TAKSGGEQDE+GRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA
Sbjct: 121 QQGSPGLSWWSPTTAKSGGEQDERGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 180
Query: 772 GNLNEEEWVTVYGFSPGDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAQKALN 951
GNLNEEEWVTVYGFSPGDTN+VLREFEKCGEILKHVPGPRDANWMHILYQNRSDA KALN
Sbjct: 181 GNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN 240
Query: 952 KNGMQINGVLIVGVKPLDPMQRLALNERLNNQGFMPLPLPSARNSEVSTLKAPSRPYYLQ 1131
KNGMQINGVLIVGVK LDPMQR ALNERL NQGFMPLPLPSARNSEVS+LKAPSRPYYLQ
Sbjct: 241 KNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAPSRPYYLQ 300
Query: 1132 NGNSSARQTGGTIASPTKSLVSKIMDLMFGV 1224
NGNS+ARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct: 301 NGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
Length = 331
Score = 624 bits (1609), Expect = e-176
Identities = 311/331 (93%), Positives = 317/331 (95%)
Frame = +1
Query: 232 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKHSSPGQAAAVSALWRENFGSSDLPPPPVF 411
MSTTVQRTPRS R SLFFQDLASPVSARRGK SSPGQAAAVS+LWRENFGSSDLPPPPVF
Sbjct: 1 MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVF 60
Query: 412 TLEDRSDFSPESGILDYQISPETKSDNRTPIQTSNREFSTPAKSKSEASTSYALRGVQQS 591
TLEDRSDFSPESGILDYQISPE KSD RTPIQTSN+EFSTP KSKSEASTSYALRGVQQ+
Sbjct: 61 TLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQQN 120
Query: 592 QQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 771
QQ SPGLSWWSP TAKS GEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA
Sbjct: 121 QQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 180
Query: 772 GNLNEEEWVTVYGFSPGDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAQKALN 951
GNLNEEEWVTVYGFSPGDTN+VLREFEKCGEILKHVPGPRDANW+HILYQNRSDA KALN
Sbjct: 181 GNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALN 240
Query: 952 KNGMQINGVLIVGVKPLDPMQRLALNERLNNQGFMPLPLPSARNSEVSTLKAPSRPYYLQ 1131
KNGMQINGVLIVGVK LDPMQR ALNERL NQGFMPLPL SARNSEVSTLKAPSRPYYLQ
Sbjct: 241 KNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYLQ 300
Query: 1132 NGNSSARQTGGTIASPTKSLVSKIMDLMFGV 1224
NGNS+ARQTGGTIASPTKSLVSKIMDLMFGV
Sbjct: 301 NGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
>ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|355486741|gb|AES67944.1|
Nucleoporin NUP53 [Medicago truncatula]
Length = 330
Score = 587 bits (1514), Expect = e-165
Identities = 290/331 (87%), Positives = 307/331 (92%)
Frame = +1
Query: 232 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKHSSPGQAAAVSALWRENFGSSDLPPPPVF 411
MSTT QRTPRSGRQSLFFQDLASPV+ARRGK SSPGQ+ A S+LWRENFG+SDLPPPP F
Sbjct: 1 MSTTAQRTPRSGRQSLFFQDLASPVNARRGKFSSPGQSGASSSLWRENFGNSDLPPPPFF 60
Query: 412 TLEDRSDFSPESGILDYQISPETKSDNRTPIQTSNREFSTPAKSKSEASTSYALRGVQQS 591
TLEDRSDFSPESGILDYQ+SPETKSD++TPIQT NREFSTPAK KSEASTSYALRGVQQ+
Sbjct: 61 TLEDRSDFSPESGILDYQMSPETKSDHKTPIQTPNREFSTPAKGKSEASTSYALRGVQQN 120
Query: 592 QQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 771
QQ S L+WWS + AKSGGEQ+EKGR SPVEGVVQPGALITLPPP EVARPEVQRNSLPA
Sbjct: 121 QQGSLSLNWWS-SPAKSGGEQEEKGRGSPVEGVVQPGALITLPPPPEVARPEVQRNSLPA 179
Query: 772 GNLNEEEWVTVYGFSPGDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAQKALN 951
GNLNEEEWVTVYGFSP DTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRS AQ ALN
Sbjct: 180 GNLNEEEWVTVYGFSPNDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSAAQNALN 239
Query: 952 KNGMQINGVLIVGVKPLDPMQRLALNERLNNQGFMPLPLPSARNSEVSTLKAPSRPYYLQ 1131
KNG+QINGVLI+GVKPLDPMQR AL ERLNNQGFMPLPLP+ARNSEVST +APSRPYYLQ
Sbjct: 240 KNGIQINGVLIIGVKPLDPMQRQALTERLNNQGFMPLPLPTARNSEVSTSRAPSRPYYLQ 299
Query: 1132 NGNSSARQTGGTIASPTKSLVSKIMDLMFGV 1224
NGN++ RQTGGTIASPTKS SKIMDLMF V
Sbjct: 300 NGNATTRQTGGTIASPTKSFASKIMDLMFAV 330
>gb|ACU23058.1| unknown [Glycine max]
Length = 307
Score = 579 bits (1492), Expect = e-163
Identities = 287/307 (93%), Positives = 293/307 (95%)
Frame = +1
Query: 232 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKHSSPGQAAAVSALWRENFGSSDLPPPPVF 411
MSTTVQRTPRS R SLFFQDLASPVSARRGK SSPGQAAAVS+LWRENFGSSDLPPPPVF
Sbjct: 1 MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVF 60
Query: 412 TLEDRSDFSPESGILDYQISPETKSDNRTPIQTSNREFSTPAKSKSEASTSYALRGVQQS 591
TLEDRSDFSPESGILDYQISPE KSD RTPIQTSN+EFSTP KSKSEASTSYALRGVQQ+
Sbjct: 61 TLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGVQQN 120
Query: 592 QQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 771
QQ SPGLSWWSP TAKS GEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA
Sbjct: 121 QQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 180
Query: 772 GNLNEEEWVTVYGFSPGDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAQKALN 951
GNLNEEEWVTVYGFSPGDTN+VLREFEKCGEILKHVPGPRDANW+HILYQNRSDA KALN
Sbjct: 181 GNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKALN 240
Query: 952 KNGMQINGVLIVGVKPLDPMQRLALNERLNNQGFMPLPLPSARNSEVSTLKAPSRPYYLQ 1131
KNGMQINGVLIVGVK LDPMQR ALNERL NQGFMPLPL SARNSEVSTLKAPSRPYYLQ
Sbjct: 241 KNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYLQ 300
Query: 1132 NGNSSAR 1152
NGNS+AR
Sbjct: 301 NGNSTAR 307
>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
gi|297743215|emb|CBI36082.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 512 bits (1318), Expect = e-142
Identities = 262/332 (78%), Positives = 284/332 (85%), Gaps = 1/332 (0%)
Frame = +1
Query: 232 MSTTVQRTPRSGRQSLFFQDLASPVSARRGKHSSPGQAAAVSALWRENFGSSDLPPPPVF 411
MSTTVQRTPRSGRQSLFFQDLASPVS+RRGK +S GQAAAVSALW +NF SDLPPPP++
Sbjct: 1 MSTTVQRTPRSGRQSLFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMY 60
Query: 412 TLEDRSDFSPESGILDYQISPETKSDNRTPIQTSNREFSTPAKSKSEASTSYALRGVQQS 591
TLEDRSDFSPESGILDY +SPE KSD RTP+ S R+F TP K KSEASTS
Sbjct: 61 TLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTS--------- 111
Query: 592 QQSSPGLSWWSPATAKSGGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLPA 771
S LSWWSPA KSGG+Q+EKG+ SPVEGVVQPGALITLPPP EVARPE+QRN LPA
Sbjct: 112 ---SASLSWWSPA--KSGGDQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQRNCLPA 166
Query: 772 GNLNEEEWVTVYGFSPGDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAQKALN 951
GNL+EEEWVTVYGFSPGDTNLVLREFEKCG ILKHVPGPRDANW+HILYQNRSDAQKAL+
Sbjct: 167 GNLDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALS 226
Query: 952 KNGMQINGVLIVGVKPLDPMQRLALNERLNNQGFMPLPLP-SARNSEVSTLKAPSRPYYL 1128
KNGMQINGVLIVGVKPLDPMQR ALNERLNNQGFM LP P S+R+ E + L+ RPYYL
Sbjct: 227 KNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVSPRPYYL 286
Query: 1129 QNGNSSARQTGGTIASPTKSLVSKIMDLMFGV 1224
QNG S+ARQ+ G IASP KS+VSKIMDLMFGV
Sbjct: 287 QNG-SNARQSSGAIASPAKSVVSKIMDLMFGV 317