BLASTX nr result

ID: Glycyrrhiza23_contig00001047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001047
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACO54858.1| zinc finger protein ZF3 [Cicer arietinum]              380   e-103
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   356   9e-96
gb|ACU23866.1| unknown [Glycine max]                                  353   9e-95
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   346   9e-93
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   333   1e-88

>gb|ACO54858.1| zinc finger protein ZF3 [Cicer arietinum]
          Length = 385

 Score =  380 bits (977), Expect = e-103
 Identities = 182/225 (80%), Positives = 198/225 (88%)
 Frame = +1

Query: 118 MSMLLGEPPPHRANPTVHVPPWSMVCDSTPEEMFSPLTAANADYSPYYLHDALSALQHYV 297
           MSM+LGEPP HR NPT+HVPPW M+ DST E +FSPLT  N DYSPYYL +ALSALQHY+
Sbjct: 1   MSMMLGEPP-HRTNPTIHVPPWQMMSDSTAE-IFSPLTT-NDDYSPYYLQEALSALQHYI 57

Query: 298 VPLNDNDDADSDLEVVPGGESVDAYSGDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKA 477
            P N++DD DSD + +P  ESVD YS D+FRMFEFK+RRCARGRSHDWTECPYAHPGEKA
Sbjct: 58  -PSNEHDD-DSDSDAIPSHESVDVYSCDNFRMFEFKIRRCARGRSHDWTECPYAHPGEKA 115

Query: 478 RRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRV 657
           RRRDPRKYHYSGTACPDFRKGS KKGD+CE+AHGVFECWLHPARYRTQPCKDGTSCRRRV
Sbjct: 116 RRRDPRKYHYSGTACPDFRKGSSKKGDSCEFAHGVFECWLHPARYRTQPCKDGTSCRRRV 175

Query: 658 CFFAHTAEQLRVLPQQSPRSVANSADSYDGSPLRLVIESSCAKTL 792
           CFFAHT+EQLR   QQSPRSV NS DSYDGSPLRL IESSC K+L
Sbjct: 176 CFFAHTSEQLRTPTQQSPRSV-NSTDSYDGSPLRLAIESSCVKSL 219



 Score =  152 bits (385), Expect = 2e-34
 Identities = 83/135 (61%), Positives = 84/135 (62%)
 Frame = +3

Query: 951  RSLGXXXXXXNEMVASLRNLQLGKMNSLPSSWNVPMGSPGFGSPRGPVIRPGFCSLXXXX 1130
            RS G      NEMV SLRNLQLGKM SLPSSWNV MGSP FGSPRGPVIRPGFCSL    
Sbjct: 246  RSFGFGSVNVNEMVVSLRNLQLGKMKSLPSSWNVQMGSPRFGSPRGPVIRPGFCSL---- 301

Query: 1131 XXXQAAPGXXXXXXXXXXXXXXXXXXXXXXXXRGGGNYFDLWDQRCEEEPVMERVESGRD 1310
                                            R G N+FDLWDQRCEEEP MERVESGRD
Sbjct: 302  -----------------------PTTPTQTPNRSGVNHFDLWDQRCEEEPAMERVESGRD 338

Query: 1311 IRAKMFEKLSKENSL 1355
            IR KMFEKLSKENSL
Sbjct: 339  IRVKMFEKLSKENSL 353


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  356 bits (914), Expect = 9e-96
 Identities = 182/226 (80%), Positives = 188/226 (83%), Gaps = 3/226 (1%)
 Frame = +1

Query: 124 MLLGEPPPHRANPTVHVPPWSMVCDSTPEEMFSPLTAANADYSPYYLHDALSALQHYVVP 303
           M+LGE   HRANPTVHVPPW      TPE +FSP T  NADYSPY L +ALSALQHY   
Sbjct: 1   MMLGET--HRANPTVHVPPW------TPE-IFSPYTG-NADYSPYSLQEALSALQHY--- 47

Query: 304 LNDNDDADSDLEVVPGGES---VDAYSGDHFRMFEFKVRRCARGRSHDWTECPYAHPGEK 474
             ++ DA+SD E  P  E    VDAYS DHFRMFEFKVRRCARGRSHDWTECPYAHPGEK
Sbjct: 48  --ESTDAESDSEF-PSREPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEK 104

Query: 475 ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR 654
           ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR
Sbjct: 105 ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR 164

Query: 655 VCFFAHTAEQLRVLPQQSPRSVANSADSYDGSPLRLVIESSCAKTL 792
           VCFFAHT EQLRVLPQQSPR    SADSYDGSPLR  IESSCAKTL
Sbjct: 165 VCFFAHTPEQLRVLPQQSPR----SADSYDGSPLRHAIESSCAKTL 206



 Score =  134 bits (336), Expect = 9e-29
 Identities = 77/125 (61%), Positives = 81/125 (64%)
 Frame = +3

Query: 981  NEMVASLRNLQLGKMNSLPSSWNVPMGSPGFGSPRGPVIRPGFCSLXXXXXXXQAAPGXX 1160
            NEMVASLRNLQLGK+ SLPSSWNV MG  GFGSPRGP+IRPGF SL         AP   
Sbjct: 235  NEMVASLRNLQLGKVKSLPSSWNV-MGPSGFGSPRGPMIRPGFFSL---PTTPTQAP--- 287

Query: 1161 XXXXXXXXXXXXXXXXXXXXXXRGGGNYFDLWDQRCEEEPVMERVESGRDIRAKMFEKLS 1340
                                  RGG NYFD WDQ CEEEPVMERVESGR+IRA+MF KLS
Sbjct: 288  ---------------------TRGGVNYFDKWDQSCEEEPVMERVESGRNIRARMFAKLS 326

Query: 1341 KENSL 1355
            KEN L
Sbjct: 327  KENHL 331


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  353 bits (905), Expect = 9e-95
 Identities = 177/223 (79%), Positives = 184/223 (82%)
 Frame = +1

Query: 124 MLLGEPPPHRANPTVHVPPWSMVCDSTPEEMFSPLTAANADYSPYYLHDALSALQHYVVP 303
           M+LGE   HRANP VHVPPW      TPE +FSP T  NADYSPY L +ALSALQHY   
Sbjct: 1   MMLGET--HRANPAVHVPPW------TPE-IFSPYTG-NADYSPYSLQEALSALQHYE-- 48

Query: 304 LNDNDDADSDLEVVPGGESVDAYSGDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARR 483
            + N ++DS+         VDAYS DHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARR
Sbjct: 49  -STNAESDSEFPSREPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARR 107

Query: 484 RDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCF 663
           RDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCF
Sbjct: 108 RDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCF 167

Query: 664 FAHTAEQLRVLPQQSPRSVANSADSYDGSPLRLVIESSCAKTL 792
           FAHT EQLRVLPQQSPR    SADSYDGSPLR  IESSCAKTL
Sbjct: 168 FAHTPEQLRVLPQQSPR----SADSYDGSPLRHAIESSCAKTL 206



 Score =  134 bits (336), Expect = 9e-29
 Identities = 77/125 (61%), Positives = 81/125 (64%)
 Frame = +3

Query: 981  NEMVASLRNLQLGKMNSLPSSWNVPMGSPGFGSPRGPVIRPGFCSLXXXXXXXQAAPGXX 1160
            NEMVASLRNLQLGK+ SLPSSWNV MG  GFGSPRGP+IRPGF SL         AP   
Sbjct: 235  NEMVASLRNLQLGKVKSLPSSWNV-MGPSGFGSPRGPMIRPGFFSL---PTTPTQAP--- 287

Query: 1161 XXXXXXXXXXXXXXXXXXXXXXRGGGNYFDLWDQRCEEEPVMERVESGRDIRAKMFEKLS 1340
                                  RGG NYFD WDQ CEEEPVMERVESGR+IRA+MF KLS
Sbjct: 288  ---------------------TRGGVNYFDKWDQSCEEEPVMERVESGRNIRARMFAKLS 326

Query: 1341 KENSL 1355
            KEN L
Sbjct: 327  KENHL 331


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  346 bits (888), Expect = 9e-93
 Identities = 174/225 (77%), Positives = 185/225 (82%), Gaps = 3/225 (1%)
 Frame = +1

Query: 124 MLLGEPPPHRANPTVHVPPWSMVCDSTPEEMFSPLTAANADYSPYYLHDALSALQHYVVP 303
           M+LGE   HR NPTVHVPPW+        E+FSP T  NADYSPY + +ALSALQHY   
Sbjct: 1   MMLGET--HRPNPTVHVPPWA-------PEIFSPYTG-NADYSPYSMQEALSALQHY--- 47

Query: 304 LNDNDDADSDLEVVPGGES---VDAYSGDHFRMFEFKVRRCARGRSHDWTECPYAHPGEK 474
             ++ DA+SD EV P  E    VDAYS DHFRMFEFKVRRCAR RSHDWT+CPYAHPGEK
Sbjct: 48  --ESTDAESDSEV-PSREPEVPVDAYSCDHFRMFEFKVRRCARCRSHDWTDCPYAHPGEK 104

Query: 475 ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR 654
           ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR
Sbjct: 105 ARRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRR 164

Query: 655 VCFFAHTAEQLRVLPQQSPRSVANSADSYDGSPLRLVIESSCAKT 789
           VCFFAHT +QLRVLPQQSPR    SADSYDGSPLR  IESSCAK+
Sbjct: 165 VCFFAHTPDQLRVLPQQSPR----SADSYDGSPLRHAIESSCAKS 205



 Score =  133 bits (334), Expect = 2e-28
 Identities = 79/126 (62%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
 Frame = +3

Query: 981  NEMVASLRNLQLGKMNSLPSSWNVPMGSPGFGSPRGPVIRPGFCSLXXXXXXXQAAPGXX 1160
            NEMVASLRNLQLGK+ SLPSSWNV MGS GFGSPRGP+IRPGF SL         AP   
Sbjct: 232  NEMVASLRNLQLGKVKSLPSSWNV-MGSSGFGSPRGPMIRPGFFSL---PTTPTQAP--- 284

Query: 1161 XXXXXXXXXXXXXXXXXXXXXXRGGGNYFDLWDQR-CEEEPVMERVESGRDIRAKMFEKL 1337
                                  RGG NYFD WDQ  CEEEPVMERVESGR IRA+MFEKL
Sbjct: 285  ---------------------TRGGVNYFDQWDQSCCEEEPVMERVESGRSIRARMFEKL 323

Query: 1338 SKENSL 1355
            SKEN L
Sbjct: 324  SKENHL 329


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  333 bits (853), Expect = 1e-88
 Identities = 162/214 (75%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
 Frame = +1

Query: 124 MLLGEPPPHRANPTVHVPPWSMVCDSTPEEMFSPLTA-ANA-DYSPYYLHDALSALQHYV 297
           M+LGE   HRANPTVHVPPW    D T E   + LT   NA +YSPYYL +AL+ALQ ++
Sbjct: 1   MMLGEH--HRANPTVHVPPWPTHDDPTAEMYSAFLTNDVNAGEYSPYYLQEALTALQRFL 58

Query: 298 VPLNDNDDADSDLEVVPGGESVDAYSGDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKA 477
            P N+ D ADSD E  P   +VDAYS DHFRM+EFKVRRCARGRSHDWTECPYAHPGEKA
Sbjct: 59  -PSNETD-ADSDTEAQPDA-AVDAYSCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKA 115

Query: 478 RRRDPRKYHYSGTACPDFRKGSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRV 657
           RRRDPRK+HYSG ACP+FRKG+CKKGD CE+AHGVFECWLHPARYRTQPCKDGTSCRRRV
Sbjct: 116 RRRDPRKFHYSGAACPEFRKGNCKKGDTCEFAHGVFECWLHPARYRTQPCKDGTSCRRRV 175

Query: 658 CFFAHTAEQLRVLPQQSPRSVANSADSYDGSPLR 759
           CFFAHT EQLRVLP QSPRS ANS++SYDGSP+R
Sbjct: 176 CFFAHTPEQLRVLPMQSPRSAANSSESYDGSPMR 209



 Score =  135 bits (339), Expect = 4e-29
 Identities = 74/125 (59%), Positives = 78/125 (62%)
 Frame = +3

Query: 981  NEMVASLRNLQLGKMNSLPSSWNVPMGSPGFGSPRGPVIRPGFCSLXXXXXXXQAAPGXX 1160
            NEMVASLRNLQLGKM S+P S NV +GSPG+GSPRG V+RPGFCSL              
Sbjct: 238  NEMVASLRNLQLGKMKSMPQSRNVSVGSPGYGSPRGSVLRPGFCSLPTTPTQQPV----- 292

Query: 1161 XXXXXXXXXXXXXXXXXXXXXXRGGGNYFDLWDQRCEEEPVMERVESGRDIRAKMFEKLS 1340
                                  R G N FD WDQ CEEEPVMERVESGR IRAKMFEKLS
Sbjct: 293  ----------------------RSGVNCFDFWDQSCEEEPVMERVESGRGIRAKMFEKLS 330

Query: 1341 KENSL 1355
            KENSL
Sbjct: 331  KENSL 335


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