BLASTX nr result

ID: Glycyrrhiza23_contig00001033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001033
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44192.1| unknown [Medicago truncatula]                          324   3e-86
ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ri...   306   8e-81
gb|AEE25654.1| auxin-responsive protein [Gossypium hirsutum]          305   2e-80
ref|XP_002328494.1| predicted protein [Populus trichocarpa] gi|1...   305   2e-80

>gb|AFK44192.1| unknown [Medicago truncatula]
          Length = 253

 Score =  324 bits (831), Expect = 3e-86
 Identities = 184/270 (68%), Positives = 193/270 (71%)
 Frame = +3

Query: 183 VVDAERDKYSMINFEETELRLGLPGGSANDIHGESSPLKSSGGKRGFSETANVDLKLNLS 362
           V DAERDKYS+INFEETELRLGLPG  A D HGES P+K+S GKRGFSETANVDLKLNLS
Sbjct: 4   VGDAERDKYSLINFEETELRLGLPG--AGD-HGES-PVKNSCGKRGFSETANVDLKLNLS 59

Query: 363 SSTGNDLXXXXXXXXXXXXXQKGXXXXXXXXXXXXXXXXXXXXXXXXXXQVVGWPPVRSF 542
               +                KG                          QVVGWPPVRSF
Sbjct: 60  PINDS---ASSSPTIASVAENKGKDTTTSATVSPPPRAKA---------QVVGWPPVRSF 107

Query: 543 RKNIVSTSTSVQKSNNEEAEKSXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELS 722
           RKNIV+    V + +N E E             FVKVSMDGAPYLRKVDLKLYKSYQELS
Sbjct: 108 RKNIVN----VHQKSNSETEVDKSISGGGGNGAFVKVSMDGAPYLRKVDLKLYKSYQELS 163

Query: 723 DALAKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWEMF 902
           DALAKMFSSFTI NCGSQ  KDFMNESKL+DLLNGSDYVPTYEDKDGDWMLVGDVPWEMF
Sbjct: 164 DALAKMFSSFTIDNCGSQVTKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMF 223

Query: 903 VESCKRLRIMKGSEAIGLAPRAVEKCKNRS 992
           V+SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 224 VQSCKRLRIMKGSEAIGLAPRAVEKCKNRS 253


>ref|XP_002319075.1| predicted protein [Populus trichocarpa] gi|222857451|gb|EEE94998.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  318 bits (815), Expect = 2e-84
 Identities = 175/269 (65%), Positives = 190/269 (70%)
 Frame = +3

Query: 183 VVDAERDKYSMINFEETELRLGLPGGSANDIHGESSPLKSSGGKRGFSETANVDLKLNLS 362
           ++ AE +KYSMINFEETELRLGLPGG  N   GE   +  S GKRGFSET  VDLKLNLS
Sbjct: 4   IMGAEPEKYSMINFEETELRLGLPGGIGNGNDGE---VAKSNGKRGFSET--VDLKLNLS 58

Query: 363 SSTGNDLXXXXXXXXXXXXXQKGXXXXXXXXXXXXXXXXXXXXXXXXXXQVVGWPPVRSF 542
           +                   + G                          QVVGWPP+RSF
Sbjct: 59  TKESG---------------KGGDEEKVMKEKTVAPPASTDPAKPPAKAQVVGWPPIRSF 103

Query: 543 RKNIVSTSTSVQKSNNEEAEKSXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELS 722
           RKN+++    VQK++N+  EKS           FVKVSMDGAPYLRKVDLKLYKSYQELS
Sbjct: 104 RKNVMA----VQKNSNDNGEKSGSSGTGVA---FVKVSMDGAPYLRKVDLKLYKSYQELS 156

Query: 723 DALAKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWEMF 902
           DAL KMFSSFTIGNCGSQGMKDFMNESKL+DLLNGSDYVPTYEDKDGDWMLVGDVPWEMF
Sbjct: 157 DALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMF 216

Query: 903 VESCKRLRIMKGSEAIGLAPRAVEKCKNR 989
           V+SCKRLRIMKGSEAIGLAPRAVEKCKNR
Sbjct: 217 VDSCKRLRIMKGSEAIGLAPRAVEKCKNR 245


>ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ricinus communis]
           gi|223529121|gb|EEF31101.1| Auxin-responsive protein
           IAA16, putative [Ricinus communis]
          Length = 257

 Score =  306 bits (784), Expect = 8e-81
 Identities = 175/277 (63%), Positives = 188/277 (67%), Gaps = 10/277 (3%)
 Frame = +3

Query: 192 AERDKYSMINFEETELRLGLPGGS-ANDIHGESSPLKSSGGKRGFSETANVDLKLNLSSS 368
           AE DKY MINFEETELRLGLPGGS  ND     S      GKRGFSET  VDLKLNLS+ 
Sbjct: 7   AEPDKYMMINFEETELRLGLPGGSNVND-----SEFAKVNGKRGFSET--VDLKLNLSTK 59

Query: 369 --TGNDLXXXXXXXXXXXXXQKGXXXXXXXXXXXXXXXXXXXXXXXXXXQVVGWPPVRSF 542
             +G D+                                          QVVGWPP+RSF
Sbjct: 60  EPSGKDVIVGEETMKEKATVPSSSNDPAKPPAKA---------------QVVGWPPIRSF 104

Query: 543 RKNIVSTSTSVQKSNNEEAEK-------SXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLY 701
           RKN+++    VQK++ +E EK       +           FVKVSMDGAPYLRKVDLKLY
Sbjct: 105 RKNVMA----VQKNSTDEGEKGTATSAPAAAATSGSTSAAFVKVSMDGAPYLRKVDLKLY 160

Query: 702 KSYQELSDALAKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVG 881
           KSYQELSDAL KMFSSFTIGNCGSQGMKDFMNESKL+DLLNGS+YVPTYEDKDGDWMLVG
Sbjct: 161 KSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVG 220

Query: 882 DVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 992
           DVPWEMFV SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 221 DVPWEMFVNSCKRLRIMKGSEAIGLAPRAVEKCKNRS 257


>gb|AEE25654.1| auxin-responsive protein [Gossypium hirsutum]
          Length = 246

 Score =  305 bits (780), Expect = 2e-80
 Identities = 171/276 (61%), Positives = 191/276 (69%), Gaps = 6/276 (2%)
 Frame = +3

Query: 183 VVDAERDKYSMINFEETELRLGLPGGSANDIHGESSPLKSSGGKRGFSETANVDLKLNLS 362
           ++  E DKYS INFEETELRLGLPG + ND  GE++    + GKRGFSET N  LKLNLS
Sbjct: 4   IMGTEDDKYSTINFEETELRLGLPGANGND--GETT---KNNGKRGFSETVN--LKLNLS 56

Query: 363 S----STGNDLXXXXXXXXXXXXXQKGXXXXXXXXXXXXXXXXXXXXXXXXXXQVVGWPP 530
           S    +  +D               K                           QVVGWPP
Sbjct: 57  SKETVAEDSDKMKEKSSTDPAKPPAKA--------------------------QVVGWPP 90

Query: 531 VRSFRKNI--VSTSTSVQKSNNEEAEKSXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYK 704
           VRSFRKNI  V  ++S ++  +++A  S           FVKVSMDGAPYLRKVDLKLYK
Sbjct: 91  VRSFRKNIMAVQKASSEEEGGSKKAGNSAAAITTTTAAAFVKVSMDGAPYLRKVDLKLYK 150

Query: 705 SYQELSDALAKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGD 884
           SYQ+LSDAL+KMFSSFTIGNCGS GMKDFMNESKL+DLLNGS+YVPTYEDKDGDWMLVGD
Sbjct: 151 SYQQLSDALSKMFSSFTIGNCGSHGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGD 210

Query: 885 VPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 992
           VPWEMFV+SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 211 VPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 246


>ref|XP_002328494.1| predicted protein [Populus trichocarpa] gi|118484744|gb|ABK94241.1|
           unknown [Populus trichocarpa]
           gi|222838209|gb|EEE76574.1| predicted protein [Populus
           trichocarpa]
          Length = 250

 Score =  305 bits (780), Expect = 2e-80
 Identities = 169/265 (63%), Positives = 187/265 (70%), Gaps = 1/265 (0%)
 Frame = +3

Query: 201 DKYSMINFEETELRLGLPGGSANDIHGESSPLKSSGGKRGFSETANVDLKLNLSSS-TGN 377
           D YSMIN+EETELRLGLPGG++N   GE++      GKRGFSET  VDLKLNLS+  TG 
Sbjct: 11  DTYSMINYEETELRLGLPGGASNGNDGEAA---KGNGKRGFSET--VDLKLNLSTKETGK 65

Query: 378 DLXXXXXXXXXXXXXQKGXXXXXXXXXXXXXXXXXXXXXXXXXXQVVGWPPVRSFRKNIV 557
           D                                           QVVGWPP+RSFRKN++
Sbjct: 66  D---------------GSDQEKVVMKEKTVAPRPNDPAKPPSKAQVVGWPPIRSFRKNVM 110

Query: 558 STSTSVQKSNNEEAEKSXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALAK 737
           +    VQK++N+E EK+           FVKVSMDGAPYLRKVDLKLYKSY+ELSDAL K
Sbjct: 111 A----VQKNSNDEGEKASSSGTTGTAA-FVKVSMDGAPYLRKVDLKLYKSYRELSDALGK 165

Query: 738 MFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCK 917
           MFSSFTIGNCGSQG KDFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPW MFV+SCK
Sbjct: 166 MFSSFTIGNCGSQGTKDFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCK 225

Query: 918 RLRIMKGSEAIGLAPRAVEKCKNRS 992
           RLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 226 RLRIMKGSEAIGLAPRAVEKCKNRS 250


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