BLASTX nr result

ID: Glycyrrhiza23_contig00001009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001009
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA34006.1| ribosomal protein S11, partial [Glycine max]           172   3e-41
ref|XP_003549708.1| PREDICTED: 40S ribosomal protein S11-like [G...   172   3e-41
ref|NP_001236968.1| 40S ribosomal protein S11 [Glycine max] gi|1...   172   3e-41
gb|AFK49430.1| unknown [Lotus japonicus]                              172   3e-41
ref|XP_002526494.1| 40S ribosomal protein S11, putative [Ricinus...   172   3e-41

>gb|AAA34006.1| ribosomal protein S11, partial [Glycine max]
          Length = 141

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLS 180
           GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNI AHISP FRVKEGDHVIIGQCRPLS
Sbjct: 56  GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLS 115

Query: 181 KTVRFNVLKVIPAGSSSGAKKAFTGI 258
           KTVRFNVLKVIPAGSSSGAKKAFTG+
Sbjct: 116 KTVRFNVLKVIPAGSSSGAKKAFTGM 141


>ref|XP_003549708.1| PREDICTED: 40S ribosomal protein S11-like [Glycine max]
          Length = 159

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLS 180
           GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNI AHISP FRVKEGDHVIIGQCRPLS
Sbjct: 74  GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLS 133

Query: 181 KTVRFNVLKVIPAGSSSGAKKAFTGI 258
           KTVRFNVLKVIPAGSSSGAKKAFTG+
Sbjct: 134 KTVRFNVLKVIPAGSSSGAKKAFTGM 159


>ref|NP_001236968.1| 40S ribosomal protein S11 [Glycine max]
           gi|1173223|sp|P17093.2|RS11_SOYBN RecName: Full=40S
           ribosomal protein S11 gi|454848|gb|AAC14469.1| ribosomal
           protein S11 [Glycine max] gi|255625845|gb|ACU13267.1|
           unknown [Glycine max]
          Length = 159

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLS 180
           GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNI AHISP FRVKEGDHVIIGQCRPLS
Sbjct: 74  GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLS 133

Query: 181 KTVRFNVLKVIPAGSSSGAKKAFTGI 258
           KTVRFNVLKVIPAGSSSGAKKAFTG+
Sbjct: 134 KTVRFNVLKVIPAGSSSGAKKAFTGM 159


>gb|AFK49430.1| unknown [Lotus japonicus]
          Length = 159

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/86 (94%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLS 180
           GTCHSAKM RTIIVRRNYLHFIKKYQRYEKRHSNI AHISPCFRVKEGDHVIIGQCRP+S
Sbjct: 74  GTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPIS 133

Query: 181 KTVRFNVLKVIPAGSSSGAKKAFTGI 258
           KTVRFNVLKVIPAGSSSG KKAFTG+
Sbjct: 134 KTVRFNVLKVIPAGSSSGVKKAFTGV 159


>ref|XP_002526494.1| 40S ribosomal protein S11, putative [Ricinus communis]
           gi|223534169|gb|EEF35885.1| 40S ribosomal protein S11,
           putative [Ricinus communis]
          Length = 159

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/86 (95%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLS 180
           GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNI AHISPCFRVKEGDHVIIGQCRPLS
Sbjct: 74  GTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 133

Query: 181 KTVRFNVLKVIPAGSSSGAKKAFTGI 258
           KTVRFNVLKVIPAGSS GAKKAFT +
Sbjct: 134 KTVRFNVLKVIPAGSSGGAKKAFTAM 159


Top