BLASTX nr result

ID: Glycyrrhiza23_contig00000971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000971
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding prote...   111   1e-22
ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding prote...   111   1e-22
ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding prote...   106   4e-21
ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding prote...   106   4e-21
ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding prote...   104   2e-20

>ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 392

 Score =  111 bits (278), Expect = 1e-22
 Identities = 61/103 (59%), Positives = 67/103 (65%)
 Frame = -1

Query: 712 MDPSQWSXXXXXXXXXXXXXXGTSHDPSLXXXXXXXXXXXYPQRVEGAQAQDMSAMSVPT 533
           MDPSQWS              G +HDPSL           YPQ VEGAQ  DMSA+S+P 
Sbjct: 292 MDPSQWSAYYGYGQGYESYAYGATHDPSLYAYGAYAGYAQYPQNVEGAQ--DMSAVSMPM 349

Query: 532 EECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKTSPFLQQA 404
           EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+TS  LQQA
Sbjct: 350 EELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRTSQSLQQA 392


>ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  111 bits (278), Expect = 1e-22
 Identities = 61/103 (59%), Positives = 67/103 (65%)
 Frame = -1

Query: 712 MDPSQWSXXXXXXXXXXXXXXGTSHDPSLXXXXXXXXXXXYPQRVEGAQAQDMSAMSVPT 533
           MDPSQWS              G +HDPSL           YPQ VEGAQ  DMSA+S+P 
Sbjct: 301 MDPSQWSAYYGYGQGYESYAYGATHDPSLYAYGAYAGYAQYPQNVEGAQ--DMSAVSMPM 358

Query: 532 EECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKTSPFLQQA 404
           EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+TS  LQQA
Sbjct: 359 EELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRTSQSLQQA 401


>ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 392

 Score =  106 bits (265), Expect = 4e-21
 Identities = 58/103 (56%), Positives = 66/103 (64%)
 Frame = -1

Query: 712 MDPSQWSXXXXXXXXXXXXXXGTSHDPSLXXXXXXXXXXXYPQRVEGAQAQDMSAMSVPT 533
           MDPSQWS              G + DPS+           YPQ+VEGAQ  DMS +S+P 
Sbjct: 292 MDPSQWSAYYGYGQGYEAYAYGATQDPSIYTYGAYAGYAQYPQQVEGAQ--DMSVVSMPM 349

Query: 532 EECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKTSPFLQQA 404
           EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+TS  LQQA
Sbjct: 350 EELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRTSQSLQQA 392


>ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Glycine max]
          Length = 401

 Score =  106 bits (265), Expect = 4e-21
 Identities = 58/103 (56%), Positives = 66/103 (64%)
 Frame = -1

Query: 712 MDPSQWSXXXXXXXXXXXXXXGTSHDPSLXXXXXXXXXXXYPQRVEGAQAQDMSAMSVPT 533
           MDPSQWS              G + DPS+           YPQ+VEGAQ  DMS +S+P 
Sbjct: 301 MDPSQWSAYYGYGQGYEAYAYGATQDPSIYTYGAYAGYAQYPQQVEGAQ--DMSVVSMPM 358

Query: 532 EECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKTSPFLQQA 404
           EE YDPL MPDVDKLN AYLSIHG++ILGR LWQ+TS  LQQA
Sbjct: 359 EELYDPLAMPDVDKLNAAYLSIHGSSILGRSLWQRTSQSLQQA 401


>ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 410

 Score =  104 bits (259), Expect = 2e-20
 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
 Frame = -1

Query: 712 MDPSQWSXXXXXXXXXXXXXXGTSHDPSLXXXXXXXXXXXYPQRVEGAQAQDMSAMSVPT 533
           MDP+QWS              G +HDPSL           YPQ+VEGAQ  D+S MSVPT
Sbjct: 305 MDPNQWSAYYGYGQGYEAYAYGPAHDPSLYAYGAYPGYAQYPQQVEGAQ--DLSGMSVPT 362

Query: 532 ----EECYDPLTMPDVDKLNTAYLSIHGNAILGRCLWQKT-SPFLQQA 404
               EE YDPL MPDVDKLN AYLS+HG+AILGR LWQKT S  LQQA
Sbjct: 363 MEQREELYDPLAMPDVDKLNAAYLSVHGSAILGRSLWQKTCSSSLQQA 410


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