BLASTX nr result

ID: Glycyrrhiza23_contig00000855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000855
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis ...   126   2e-27
ref|XP_002272511.1| PREDICTED: 30S ribosomal protein S17 [Vitis ...   126   2e-27
emb|CAN83872.1| hypothetical protein VITISV_044471 [Vitis vinifera]   126   2e-27

>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/63 (93%), Positives = 63/63 (100%)
 Frame = -3

Query: 458 VAVDRLFHHQIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 279
           VAVDRLFHH++YNRYVKRTSKFMAHDE++LCNIGDRVRLDPSRPLSKRKHWVVAEILKKA
Sbjct: 19  VAVDRLFHHKLYNRYVKRTSKFMAHDENDLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 78

Query: 278 RIY 270
           RIY
Sbjct: 79  RIY 81


>ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|222854112|gb|EEE91659.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/63 (93%), Positives = 63/63 (100%)
 Frame = -3

Query: 458 VAVDRLFHHQIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 279
           VAVDRLFHH++YNRYVKRTSKFMAHDE+NLCNIGDRVRLDPSRPLSKRK+WVVAEILKKA
Sbjct: 19  VAVDRLFHHKLYNRYVKRTSKFMAHDENNLCNIGDRVRLDPSRPLSKRKNWVVAEILKKA 78

Query: 278 RIY 270
           RIY
Sbjct: 79  RIY 81


>ref|XP_002273671.1| PREDICTED: 30S ribosomal protein S17 [Vitis vinifera]
           gi|297745104|emb|CBI38943.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/63 (92%), Positives = 62/63 (98%)
 Frame = -3

Query: 458 VAVDRLFHHQIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 279
           VAVDRLFH++++NRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSK KHWVVAEILKKA
Sbjct: 19  VAVDRLFHNKLFNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKHKHWVVAEILKKA 78

Query: 278 RIY 270
           RIY
Sbjct: 79  RIY 81


>ref|XP_002272511.1| PREDICTED: 30S ribosomal protein S17 [Vitis vinifera]
           gi|297745094|emb|CBI38933.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/63 (92%), Positives = 62/63 (98%)
 Frame = -3

Query: 458 VAVDRLFHHQIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 279
           VAVDRLFH++++NRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSK KHWVVAEILKKA
Sbjct: 19  VAVDRLFHNKLFNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKHKHWVVAEILKKA 78

Query: 278 RIY 270
           RIY
Sbjct: 79  RIY 81


>emb|CAN83872.1| hypothetical protein VITISV_044471 [Vitis vinifera]
          Length = 200

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/63 (92%), Positives = 62/63 (98%)
 Frame = -3

Query: 458 VAVDRLFHHQIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 279
           VAVDRLFH++++NRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSK KHWVVAEILKKA
Sbjct: 120 VAVDRLFHNKLFNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKHKHWVVAEILKKA 179

Query: 278 RIY 270
           RIY
Sbjct: 180 RIY 182


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