BLASTX nr result

ID: Glycyrrhiza23_contig00000842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000842
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK4848...   150   1e-34
ref|XP_003529179.1| PREDICTED: 30S ribosomal protein S17-like [G...   148   4e-34
gb|AFK39323.1| unknown [Medicago truncatula]                          147   7e-34
ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatu...   147   7e-34
ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatu...   146   2e-33

>gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK48487.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/84 (89%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
 Frame = -3

Query: 448 VAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 269
           VAVDRLFHHK+YNRYVKRTSKFMAHDE+NLCNIGDRVRL+PSRPLSK K WVVAEILKKA
Sbjct: 19  VAVDRLFHHKVYNRYVKRTSKFMAHDENNLCNIGDRVRLNPSRPLSKNKCWVVAEILKKA 78

Query: 268 RIYVPP-SAPVSENVSSSTEAPKS 200
           RIYVPP S PVSE VSSSTEAP S
Sbjct: 79  RIYVPPTSTPVSEKVSSSTEAPAS 102


>ref|XP_003529179.1| PREDICTED: 30S ribosomal protein S17-like [Glycine max]
          Length = 101

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = -3

Query: 448 VAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 269
           VAVDRLF+HK+Y+RYVKRTSKFMAHDE+NLCNIGD+VRLDPSRPLSK KHWVVAEILKKA
Sbjct: 19  VAVDRLFYHKVYDRYVKRTSKFMAHDENNLCNIGDKVRLDPSRPLSKHKHWVVAEILKKA 78

Query: 268 RIYVPPSAPVSENVSSSTEAPKS 200
           +IYVPPS PVS NV+SS+ AP S
Sbjct: 79  QIYVPPSTPVSVNVNSSSVAPAS 101


>gb|AFK39323.1| unknown [Medicago truncatula]
          Length = 103

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = -3

Query: 448 VAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 269
           VAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRLD SRPLSK KHWVVAEILKKA
Sbjct: 19  VAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSSRPLSKHKHWVVAEILKKA 78

Query: 268 RIYVPPSAPVSENVSSSTEAPKS 200
           RIYVPPSA VSEN SS++  P S
Sbjct: 79  RIYVPPSATVSENASSNSVGPTS 101


>ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355505602|gb|AES86744.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 172

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = -3

Query: 448 VAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 269
           VAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRLD SRPLSK KHWVVAEILKKA
Sbjct: 88  VAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSSRPLSKHKHWVVAEILKKA 147

Query: 268 RIYVPPSAPVSENVSSSTEAPKS 200
           RIYVPPSA VSEN SS++  P S
Sbjct: 148 RIYVPPSATVSENASSNSVGPTS 170


>ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355493159|gb|AES74362.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 103

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = -3

Query: 448 VAVDRLFHHKIYNRYVKRTSKFMAHDEHNLCNIGDRVRLDPSRPLSKRKHWVVAEILKKA 269
           VAVDRLFHHK++NRY+KRTSKFMAHDE+NLCNIGDRVRLD SRPLSKRKHWVVAEILKKA
Sbjct: 19  VAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSSRPLSKRKHWVVAEILKKA 78

Query: 268 RIYVPPSAPVSENVSSST 215
           RIYVPPSA VSEN SS++
Sbjct: 79  RIYVPPSATVSENASSNS 96


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