BLASTX nr result

ID: Glycyrrhiza23_contig00000826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000826
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chlorop...   185   4e-66
ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chlorop...   185   4e-66
sp|P49208.1|RK1_PEA RecName: Full=50S ribosomal protein L1, chlo...   186   6e-66
ref|XP_004158181.1| PREDICTED: 50S ribosomal protein L1, chlorop...   182   2e-63
gb|ABK95268.1| unknown [Populus trichocarpa]                          181   2e-62

>ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine
           max]
          Length = 345

 Score =  185 bits (470), Expect(2) = 4e-66
 Identities = 91/93 (97%), Positives = 92/93 (98%)
 Frame = +1

Query: 226 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 405
           LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK G
Sbjct: 156 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAG 215

Query: 406 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 504
           FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP
Sbjct: 216 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 248



 Score = 91.3 bits (225), Expect(2) = 4e-66
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = +2

Query: 2   LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHF 154
           LPLKRDR RSKRFLEIQ+LRE K+EYDLKTAI+LVKETAKTKF+ETVEAHF
Sbjct: 104 LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHF 154


>ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine
           max]
          Length = 340

 Score =  185 bits (470), Expect(2) = 4e-66
 Identities = 91/93 (97%), Positives = 92/93 (98%)
 Frame = +1

Query: 226 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 405
           LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK G
Sbjct: 151 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAG 210

Query: 406 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 504
           FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP
Sbjct: 211 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 243



 Score = 91.3 bits (225), Expect(2) = 4e-66
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = +2

Query: 2   LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHF 154
           LPLKRDR RSKRFLEIQ+LRE K+EYDLKTAI+LVKETAKTKF+ETVEAHF
Sbjct: 99  LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHF 149


>sp|P49208.1|RK1_PEA RecName: Full=50S ribosomal protein L1, chloroplastic; AltName:
           Full=CL1; Flags: Precursor gi|577089|emb|CAA58020.1|
           chloroplast ribosomal protein L1 [Pisum sativum]
          Length = 208

 Score =  186 bits (473), Expect(2) = 6e-66
 Identities = 91/93 (97%), Positives = 93/93 (100%)
 Frame = +1

Query: 226 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 405
           LNIDPKYNDQQLRATV+LPKGTGKP+KVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG
Sbjct: 100 LNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 159

Query: 406 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 504
           FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP
Sbjct: 160 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 192



 Score = 89.7 bits (221), Expect(2) = 6e-66
 Identities = 44/49 (89%), Positives = 48/49 (97%)
 Frame = +2

Query: 8   LKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHF 154
           LK DRVRSKRFLEIQKLRE+K+EYDLKTAI+LVKETAKTKF+ETVEAHF
Sbjct: 50  LKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHF 98


>ref|XP_004158181.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
           sativus]
          Length = 360

 Score =  182 bits (462), Expect(2) = 2e-63
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +1

Query: 226 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 405
           LNIDPKYNDQQLRATVNLPKGTG+ VKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGG
Sbjct: 169 LNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGG 228

Query: 406 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 504
           FMEFDKLIASPDMMPKVASLGK+LGPRGLMPNP
Sbjct: 229 FMEFDKLIASPDMMPKVASLGKLLGPRGLMPNP 261



 Score = 85.5 bits (210), Expect(2) = 2e-63
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHF 154
           LPLKRDR RSKRFLEIQKLRE K EYDLKTAI+L+K+T+ TKF+ET EAHF
Sbjct: 117 LPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHF 167


>gb|ABK95268.1| unknown [Populus trichocarpa]
          Length = 355

 Score =  181 bits (458), Expect(2) = 2e-62
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 226 LNIDPKYNDQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGG 405
           LNIDPKYNDQQLRATVNLPKGTG+ VKVAVLTQGE+FDEAKNAGADLVGGEDLI+QIKGG
Sbjct: 165 LNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGG 224

Query: 406 FMEFDKLIASPDMMPKVASLGKILGPRGLMPNP 504
           FM+FDKLIASPDMMPKVASLGKILGPRGLMPNP
Sbjct: 225 FMQFDKLIASPDMMPKVASLGKILGPRGLMPNP 257



 Score = 84.0 bits (206), Expect(2) = 2e-62
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +2

Query: 2   LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHF 154
           LPLKRDR RSKRFLEIQKLRE K+EYDL TAI+++K+TA TKF+E+VEAHF
Sbjct: 113 LPLKRDRTRSKRFLEIQKLRETKKEYDLGTAISMLKKTANTKFVESVEAHF 163


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