BLASTX nr result

ID: Glycyrrhiza23_contig00000809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000809
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin...   116   6e-24
gb|AFK48333.1| unknown [Medicago truncatula]                          112   6e-23
ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chl...   107   3e-21
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr...   101   2e-19
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...   100   6e-19

>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
           gi|255632908|gb|ACU16808.1| unknown [Glycine max]
          Length = 104

 Score =  116 bits (290), Expect = 6e-24
 Identities = 59/95 (62%), Positives = 67/95 (70%)
 Frame = +1

Query: 115 LGSSAVANRSPVATQRRLVVANAARGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXXX 294
           LGS  V NRS VATQRR +V NAA+ VE  KVSY++D +G SNGRRN+MF          
Sbjct: 11  LGSPTVTNRSAVATQRRSLVVNAAKAVEAEKVSYDNDMDG-SNGRRNLMFAAAAAAVCSV 69

Query: 295 XXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCRN 399
                 DEPKPGTPEAKK YAP+CVTMPTAR+CRN
Sbjct: 70  AGMAVADEPKPGTPEAKKKYAPICVTMPTARICRN 104


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score =  112 bits (281), Expect = 6e-23
 Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
 Frame = +1

Query: 112 FLGSSAVANRSPVATQRRLVVANAARGVE--KVKVSYESDKEGNSNGRRNIMFXXXXXXX 285
           F GSSA+ANRSPVATQR+LVVANAA+ VE  K+KV+Y+++KE  +NGRRNIMF       
Sbjct: 11  FGGSSAIANRSPVATQRKLVVANAAKAVEGGKMKVNYDNEKE-ETNGRRNIMFAAAAAAV 69

Query: 286 XXXXXXXXX-DEPKPGTPEAKKVYAPVCVTMPTARVCR 396
                     DEPK G+PEAKK YAPVCVTMPTAR+CR
Sbjct: 70  CSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICR 107


>ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 105

 Score =  107 bits (266), Expect = 3e-21
 Identities = 57/96 (59%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +1

Query: 115 LGSSAVANRSPVATQRRLVVANAARGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXXX 294
           LG  AV NR  VATQRR +V NAA+ VE  KVSY++D +G SNGRRN+MF          
Sbjct: 11  LGGPAVTNRLAVATQRRSLVVNAAKAVEAEKVSYDNDMDG-SNGRRNLMFAAAAAAAVCS 69

Query: 295 XXXXXX-DEPKPGTPEAKKVYAPVCVTMPTARVCRN 399
                  DEPKPGTP AKK YAP+CVTMPTAR+CRN
Sbjct: 70  VAGMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 105


>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223543089|gb|EEF44624.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 104

 Score =  101 bits (251), Expect = 2e-19
 Identities = 50/94 (53%), Positives = 68/94 (72%)
 Frame = +1

Query: 112 FLGSSAVANRSPVATQRRLVVANAARGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXX 291
           FL S+++ ++SPV  +R LVVANAA G +KVK++++S+KE +SNGRR++MF         
Sbjct: 10  FLSSNSLGSQSPVTARRTLVVANAAAGGQKVKMNHDSEKE-SSNGRRDLMFAAVAAAACS 68

Query: 292 XXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVC 393
                  +EPK GTPEAKK Y+PVCVTMPTAR+C
Sbjct: 69  VAGVAAAEEPKAGTPEAKKFYSPVCVTMPTARIC 102


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 57/97 (58%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = +1

Query: 115 LGSSAVANRSPVATQRRLVVANAARGVEKVK-VSYESDKEGNSNGRRNIMFXXXXXXXXX 291
           LG  AV N+S VA+QRRLVV NA R VE  K + Y++ KEG SNGRR++MF         
Sbjct: 11  LGFPAVTNQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEG-SNGRRDLMFAAAAAAVST 69

Query: 292 XXXXXXXDE-PKPGTPEAKKVYAPVCVTMPTARVCRN 399
                  DE PK GTPEAKK YAPVCVTMPTAR+CRN
Sbjct: 70  FAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICRN 106


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