BLASTX nr result

ID: Glycyrrhiza23_contig00000783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000783
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596601.1| Histone H2A [Medicago truncatula] gi|3554856...   128   8e-35
ref|XP_002319269.1| histone 2 [Populus trichocarpa] gi|222857645...   128   1e-34
ref|NP_200275.1| histone H2A [Arabidopsis thaliana] gi|75311051|...   128   1e-34
ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|22286003...   128   1e-34
gb|ABK94182.1| unknown [Populus trichocarpa]                          128   1e-34

>ref|XP_003596601.1| Histone H2A [Medicago truncatula] gi|355485649|gb|AES66852.1|
           Histone H2A [Medicago truncatula]
           gi|388511865|gb|AFK43994.1| unknown [Medicago
           truncatula]
          Length = 132

 Score =  128 bits (322), Expect(2) = 8e-35
 Identities = 68/88 (77%), Positives = 69/88 (78%)
 Frame = +3

Query: 87  MAGRGKTLGSANAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 266
           MAGRGKTLGS +AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGSAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 267 XXXXXXXXGNAARDNKKTRIVPRHIQLA 350
                   GNAARDNKKTRIVPRHIQLA
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLA 88



 Score = 45.4 bits (106), Expect(2) = 8e-35
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 460 GDVTIANGGVMPNIHNLLLP 519
           GDVTIANGGVMPNIHNLLLP
Sbjct: 100 GDVTIANGGVMPNIHNLLLP 119


>ref|XP_002319269.1| histone 2 [Populus trichocarpa] gi|222857645|gb|EEE95192.1| histone
           2 [Populus trichocarpa]
          Length = 169

 Score =  128 bits (321), Expect(2) = 1e-34
 Identities = 68/91 (74%), Positives = 70/91 (76%)
 Frame = +3

Query: 78  SSSMAGRGKTLGSANAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXX 257
           + SMAGRGKTLGS  +KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP       
Sbjct: 33  NQSMAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVL 92

Query: 258 XXXXXXXXXXXGNAARDNKKTRIVPRHIQLA 350
                      GNAARDNKKTRIVPRHIQLA
Sbjct: 93  EYLAAEVLELAGNAARDNKKTRIVPRHIQLA 123



 Score = 45.4 bits (106), Expect(2) = 1e-34
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 460 GDVTIANGGVMPNIHNLLLP 519
           GDVTIANGGVMPNIHNLLLP
Sbjct: 135 GDVTIANGGVMPNIHNLLLP 154


>ref|NP_200275.1| histone H2A [Arabidopsis thaliana]
           gi|75311051|sp|Q9LD28.1|H2A6_ARATH RecName: Full=Histone
           H2A.6; AltName: Full=HTA1; AltName: Full=Protein
           RESISTANT TO AGROBACTERIUM TRANSFORMATION 5
           gi|7595337|gb|AAF64418.1|AF204967_1 histone H2A
           [Arabidopsis thaliana]
           gi|7595339|gb|AAF64419.1|AF204968_1 histone H2A
           [Arabidopsis thaliana] gi|9758956|dbj|BAB09343.1|
           histone H2A [Arabidopsis thaliana]
           gi|21593834|gb|AAM65801.1| histone H2A [Arabidopsis
           thaliana] gi|28393261|gb|AAO42059.1| putative histone
           H2A protein [Arabidopsis thaliana]
           gi|28827756|gb|AAO50722.1| putative histone H2A protein
           [Arabidopsis thaliana] gi|332009138|gb|AED96521.1|
           histone H2A [Arabidopsis thaliana]
          Length = 130

 Score =  128 bits (321), Expect(2) = 1e-34
 Identities = 68/88 (77%), Positives = 68/88 (77%)
 Frame = +3

Query: 87  MAGRGKTLGSANAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 266
           MAGRGKTLGS  AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 267 XXXXXXXXGNAARDNKKTRIVPRHIQLA 350
                   GNAARDNKKTRIVPRHIQLA
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLA 88



 Score = 45.4 bits (106), Expect(2) = 1e-34
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 460 GDVTIANGGVMPNIHNLLLP 519
           GDVTIANGGVMPNIHNLLLP
Sbjct: 100 GDVTIANGGVMPNIHNLLLP 119


>ref|XP_002316965.1| histone H2 [Populus trichocarpa] gi|222860030|gb|EEE97577.1|
           histone H2 [Populus trichocarpa]
          Length = 133

 Score =  128 bits (321), Expect(2) = 1e-34
 Identities = 68/88 (77%), Positives = 68/88 (77%)
 Frame = +3

Query: 87  MAGRGKTLGSANAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 266
           MAGRGKTLGS  AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 267 XXXXXXXXGNAARDNKKTRIVPRHIQLA 350
                   GNAARDNKKTRIVPRHIQLA
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLA 88



 Score = 45.4 bits (106), Expect(2) = 1e-34
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 460 GDVTIANGGVMPNIHNLLLP 519
           GDVTIANGGVMPNIHNLLLP
Sbjct: 100 GDVTIANGGVMPNIHNLLLP 119


>gb|ABK94182.1| unknown [Populus trichocarpa]
          Length = 134

 Score =  128 bits (321), Expect(2) = 1e-34
 Identities = 68/88 (77%), Positives = 68/88 (77%)
 Frame = +3

Query: 87  MAGRGKTLGSANAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXX 266
           MAGRGKTLGS  AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAP          
Sbjct: 1   MAGRGKTLGSGTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL 60

Query: 267 XXXXXXXXGNAARDNKKTRIVPRHIQLA 350
                   GNAARDNKKTRIVPRHIQLA
Sbjct: 61  AAEVLELAGNAARDNKKTRIVPRHIQLA 88



 Score = 45.4 bits (106), Expect(2) = 1e-34
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 460 GDVTIANGGVMPNIHNLLLP 519
           GDVTIANGGVMPNIHNLLLP
Sbjct: 100 GDVTIANGGVMPNIHNLLLP 119


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