BLASTX nr result

ID: Glycyrrhiza23_contig00000747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000747
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplast...   166   2e-39
ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast...   166   2e-39
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast...   166   2e-39
sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chlo...   166   2e-39
ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplast...   166   2e-39

>ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 480

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/89 (87%), Positives = 86/89 (96%)
 Frame = -3

Query: 269 NPSLKRGDNQWVDKIYDLMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVER 90
           NP++KRGDN+WVDKIY LMD VD YIPIPQRQT+LPFLLAVEDVFSITGRGTVATGRVER
Sbjct: 256 NPAIKRGDNEWVDKIYKLMDEVDDYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVER 315

Query: 89  GTIRIGETVELVGLRETRNTTVTGVEMFQ 3
           GT+++GETV+LVGLRETRNTTVTGVEMFQ
Sbjct: 316 GTVKVGETVDLVGLRETRNTTVTGVEMFQ 344


>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis
           vinifera]
          Length = 486

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/89 (86%), Positives = 89/89 (100%)
 Frame = -3

Query: 269 NPSLKRGDNQWVDKIYDLMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVER 90
           NPS+KRG+NQWVDKIY+LMDSVDSYIPIPQRQT+LPFLLA+EDVFSITGRGTVATGRVER
Sbjct: 262 NPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGTVATGRVER 321

Query: 89  GTIRIGETVELVGLRETRNTTVTGVEMFQ 3
           GTI++GETV++VGL++TR+TTVTGVEMFQ
Sbjct: 322 GTIKVGETVDIVGLKDTRSTTVTGVEMFQ 350


>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488736|ref|XP_003633809.1|
           PREDICTED: elongation factor Tu, chloroplastic-like
           isoform 2 [Vitis vinifera]
           gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
           factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
          Length = 487

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/89 (88%), Positives = 88/89 (98%)
 Frame = -3

Query: 269 NPSLKRGDNQWVDKIYDLMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVER 90
           NPS+KRG+N+WVDKIY+LMD+VDSYIPIPQRQT+LPFLLAVEDVFSITGRGTVATGRVER
Sbjct: 263 NPSIKRGENEWVDKIYELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVER 322

Query: 89  GTIRIGETVELVGLRETRNTTVTGVEMFQ 3
           GTI++GETV+LVGLRETR TTVTGVEMFQ
Sbjct: 323 GTIKVGETVDLVGLRETRATTVTGVEMFQ 351


>sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
           Flags: Precursor gi|18776|emb|CAA46864.1| EF-Tu [Glycine
           max] gi|448921|prf||1918220A elongation factor Tu
          Length = 479

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/89 (87%), Positives = 87/89 (97%)
 Frame = -3

Query: 269 NPSLKRGDNQWVDKIYDLMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVER 90
           NP++KRGDN+WVDKI+ LMD VD+YIPIPQRQT+LPFLLAVEDVFSITGRGTVATGRVER
Sbjct: 255 NPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVER 314

Query: 89  GTIRIGETVELVGLRETRNTTVTGVEMFQ 3
           GTI++GETV+LVGLRETRNTTVTGVEMFQ
Sbjct: 315 GTIKVGETVDLVGLRETRNTTVTGVEMFQ 343


>ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 479

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/89 (87%), Positives = 87/89 (97%)
 Frame = -3

Query: 269 NPSLKRGDNQWVDKIYDLMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVER 90
           NP++KRGDN+WVDKI+ LMD VD+YIPIPQRQT+LPFLLAVEDVFSITGRGTVATGRVER
Sbjct: 255 NPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVER 314

Query: 89  GTIRIGETVELVGLRETRNTTVTGVEMFQ 3
           GTI++GETV+LVGLRETRNTTVTGVEMFQ
Sbjct: 315 GTIKVGETVDLVGLRETRNTTVTGVEMFQ 343


Top