BLASTX nr result
ID: Glycyrrhiza23_contig00000733
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00000733 (592 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin... 122 6e-34 ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin... 119 8e-31 emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera] 119 2e-30 ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 115 3e-30 ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 115 1e-29 >ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like [Glycine max] Length = 471 Score = 122 bits (306), Expect(3) = 6e-34 Identities = 56/67 (83%), Positives = 59/67 (88%) Frame = +3 Query: 3 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRYKPSASPLIDMPVTPYPVGSLLSTR 182 LPLRPG+QPCAFYLQNGHCKFGSTCKFDHPLG MRY PSAS LID+PVTPYPVGSLLS Sbjct: 337 LPLRPGLQPCAFYLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDVPVTPYPVGSLLSQL 396 Query: 183 DPSFGAS 203 PS +S Sbjct: 397 APSTTSS 403 Score = 43.5 bits (101), Expect(3) = 6e-34 Identities = 20/29 (68%), Positives = 26/29 (89%) Frame = +2 Query: 314 SISLSDVQLSSQASTPPSSNRTTGQRGEI 400 S+SLSDVQLSSQ++ PP+S+R+T Q GEI Sbjct: 442 SVSLSDVQLSSQSNAPPNSSRSTRQSGEI 470 Score = 24.3 bits (51), Expect(3) = 6e-34 Identities = 15/49 (30%), Positives = 20/49 (40%) Frame = +1 Query: 178 PGILHSELQPEMMSVS*TEPFXXXXXXXXXXXXXXXXXXXXQGGSIYLT 324 P S+L+PE+MS S E F QGGS+ L+ Sbjct: 398 PSTTSSDLRPELMSGSKKESFSARIPSSGNSSGTSVGLIFSQGGSVSLS 446 >ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1 [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 119 bits (299), Expect(2) = 8e-31 Identities = 54/67 (80%), Positives = 57/67 (85%) Frame = +3 Query: 3 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRYKPSASPLIDMPVTPYPVGSLLSTR 182 LPLRPGVQPC FYLQNG+CKFGSTCKFDHPLG MRY PSAS L DMPV PYPVGS L+T Sbjct: 338 LPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSLATL 397 Query: 183 DPSFGAS 203 PSF +S Sbjct: 398 APSFSSS 404 Score = 39.7 bits (91), Expect(2) = 8e-31 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = +2 Query: 314 SISLSDVQLSSQASTPPSSNRTTGQRGEI 400 S+SLSDVQLS Q+S P SS+R+T Q GE+ Sbjct: 443 SVSLSDVQLSGQSSAPLSSSRSTRQGGEV 471 >emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera] Length = 1388 Score = 119 bits (299), Expect(2) = 2e-30 Identities = 54/67 (80%), Positives = 57/67 (85%) Frame = +3 Query: 3 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRYKPSASPLIDMPVTPYPVGSLLSTR 182 LPLRPGVQPC FYLQNG+CKFGSTCKFDHPLG MRY PSAS L DMPV PYPVGS L+T Sbjct: 376 LPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSLATL 435 Query: 183 DPSFGAS 203 PSF +S Sbjct: 436 APSFSSS 442 Score = 38.5 bits (88), Expect(2) = 2e-30 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = +2 Query: 314 SISLSDVQLSSQASTPPSSNRTTGQRGE 397 S+SLSDVQLS Q+S P SS+R+T Q GE Sbjct: 481 SVSLSDVQLSGQSSAPLSSSRSTRQGGE 508 >ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 32-like [Glycine max] Length = 494 Score = 115 bits (287), Expect(3) = 3e-30 Identities = 53/67 (79%), Positives = 55/67 (82%) Frame = +3 Query: 3 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRYKPSASPLIDMPVTPYPVGSLLSTR 182 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLG RY P S ID+PVTPYPVGSLLS Sbjct: 337 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGSTRYTPWVSSFIDVPVTPYPVGSLLSQL 396 Query: 183 DPSFGAS 203 PS +S Sbjct: 397 APSTTSS 403 Score = 39.7 bits (91), Expect(3) = 3e-30 Identities = 26/56 (46%), Positives = 33/56 (58%) Frame = +2 Query: 314 SISLSDVQLSSQASTPPSSNRTTGQRGEIH*SR*LTRK*FLIIIEYDFTSFDCFCL 481 S+SLS+VQLSSQ+ P SS+R+T Q EI + + I DFTS FCL Sbjct: 442 SVSLSNVQLSSQSPPPLSSSRSTRQSREIRECKLENNS---LSIGCDFTSLHYFCL 494 Score = 23.1 bits (48), Expect(3) = 3e-30 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +1 Query: 178 PGILHSELQPEMMSVS*TEPFXXXXXXXXXXXXXXXXXXXXQGGSIYLT 324 P SEL+PE+MS S E QGGS+ L+ Sbjct: 398 PSTTSSELRPELMSGSKKESLAARISSSGNSSGTSVGLIFSQGGSVSLS 446 >ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 32-like [Glycine max] Length = 473 Score = 115 bits (289), Expect(2) = 1e-29 Identities = 54/67 (80%), Positives = 57/67 (85%) Frame = +3 Query: 3 LPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRYKPSASPLIDMPVTPYPVGSLLSTR 182 LPLRPG+QPCAFYLQNGHCKFGSTCKFDH LG MRY PSAS LID+PVTPY VGSLLS Sbjct: 337 LPLRPGLQPCAFYLQNGHCKFGSTCKFDHSLGSMRYSPSASSLIDVPVTPYLVGSLLSQL 396 Query: 183 DPSFGAS 203 PS A+ Sbjct: 397 VPSTSAT 403 Score = 39.3 bits (90), Expect(2) = 1e-29 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = +2 Query: 314 SISLSDVQLSSQASTPPSSNRTTGQRGEI 400 S+ LSDVQLSSQ+S P +S+R+T Q GEI Sbjct: 444 SVLLSDVQLSSQSSAPTNSSRSTRQSGEI 472