BLASTX nr result

ID: Glycyrrhiza23_contig00000704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000704
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621892.1| Dof zinc finger protein [Medicago truncatula...   155   2e-35
ref|XP_003520022.1| PREDICTED: dof zinc finger protein DOF3.6-li...   136   1e-29
ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...   114   4e-23
gb|AAO65880.1| putative DNA-binding protein [Oryza sativa Japoni...    80   1e-12
gb|AFW67146.1| hypothetical protein ZEAMMB73_669483 [Zea mays]         80   1e-12

>ref|XP_003621892.1| Dof zinc finger protein [Medicago truncatula]
            gi|355496907|gb|AES78110.1| Dof zinc finger protein
            [Medicago truncatula]
          Length = 373

 Score =  155 bits (392), Expect = 2e-35
 Identities = 122/297 (41%), Positives = 151/297 (50%), Gaps = 8/297 (2%)
 Frame = -3

Query: 1168 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC--XXXXXXXXXXXXRPLKLPXXXXXXX 995
            NY+LSQPRHFCKTCRRYWT+GGALRNVPVGGGC               PLK P       
Sbjct: 94   NYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNNKRRKGNSVSKSPLK-PNHNDHLQ 152

Query: 994  XXXXXXXXXGCIATINNSSD---VNNNVLMGGGHLPTTHQFPFLTSSLQHHHYYYNNNGD 824
                        A+ N+SS+    N+NV +G  + PT  QFPF+TS  +H+   Y + G 
Sbjct: 153  IGTGAAAGGSSSASANSSSNNGCTNSNVNIGMPNFPT--QFPFVTSLHRHNDNSYASEG- 209

Query: 823  FGSRF--GATNPTSSLVAKNIGNGSAHEFQIXXXXXXXXXXSLCLGEQWRXXXXXXXXXX 650
             GS      +N T++ V   +G+GS+    I          S  +GEQWR          
Sbjct: 210  IGSLLAKNMSNSTTTNVEFQLGSGSS---SIGNGNGGSLLISNGIGEQWR-----FPNSL 261

Query: 649  XXXXXXXXXQFPFLTNLEPQIGLFQF-XXXXXXXXXNIIRSKAVDSTSVSTGILMPHQLN 473
                     QFPFL+NL+PQIGLFQF          N+ RSK   S+SVS G +MP Q+N
Sbjct: 262  QIHQQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIG-MMP-QVN 319

Query: 472  TIKMEANNGQGQXXXXXXXXXXXXXXXXXXXXLFWNGSDGNNIINAWSEVPSFTPSP 302
            T+K+E NN QG                     LFWNG +GN   NAW+EVPSFTP P
Sbjct: 320  TVKVEENNHQG-----LSLPKNLLSGSGNSNDLFWNG-NGNE--NAWNEVPSFTPPP 368


>ref|XP_003520022.1| PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max]
          Length = 371

 Score =  136 bits (342), Expect = 1e-29
 Identities = 122/313 (38%), Positives = 147/313 (46%), Gaps = 20/313 (6%)
 Frame = -3

Query: 1168 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC--XXXXXXXXXXXXRPLKLPXXXXXXX 995
            NYSLSQPRHFCKTCRRYWTRGGALR+VPVGGGC               P+K         
Sbjct: 97   NYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRNKGNSARSKSPMK--------- 147

Query: 994  XXXXXXXXXGCIATINNSSDVNNNVLMGGGHLP---TTHQFPFLTSSLQHHHYYYNNNGD 824
                        A  ++S    ++V+M   HLP   T  QFPFL +SL H++  Y + G 
Sbjct: 148  --------PSASANSSSSGCTPDHVMM--THLPTPITPTQFPFL-ASLHHYNGDYVSGG- 195

Query: 823  FGSRFGATNPTSSLVAKNIGNGSAH-EFQIXXXXXXXXXXSLCLGEQWRXXXXXXXXXXX 647
             GS FGA   T+ LVA+N GN ++  EFQI          ++  G               
Sbjct: 196  IGSHFGAI--TTPLVARNNGNNTSDVEFQI-GTSSASSLGNISGGAMLSNNGLGDQQWRF 252

Query: 646  XXXXXXXXQFPFL-TNLEPQIGLFQF------------XXXXXXXXXNIIRSKAVDSTSV 506
                    QFPFL TN EPQIG+FQF                     N IRSK +DS + 
Sbjct: 253  NNLQQVQHQFPFLSTNFEPQIGVFQFGGGENNNAEPPSYAKGHGGRFNNIRSK-MDSINS 311

Query: 505  STGILMPHQLNTIKMEANNGQGQXXXXXXXXXXXXXXXXXXXXLFW-NGSDGNNIINAWS 329
            S   ++P QLNTIK+E N G                       + W NGS G    NAWS
Sbjct: 312  SVSGIVP-QLNTIKLEENQG--------LSLSKNLLMTSSGNGVLWNNGSSG----NAWS 358

Query: 328  EVPSFTPSPSHLL 290
            EVPSF PSP+HLL
Sbjct: 359  EVPSFIPSPNHLL 371


>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
            gi|222832921|gb|EEE71398.1| f-box family protein [Populus
            trichocarpa]
          Length = 337

 Score =  114 bits (286), Expect = 4e-23
 Identities = 98/301 (32%), Positives = 123/301 (40%), Gaps = 8/301 (2%)
 Frame = -3

Query: 1168 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCXXXXXXXXXXXXR-PLKLPXXXXXXXX 992
            NYSL+QPRHFCKTCRRYWTRGGALRNVPVGGGC            + P+K          
Sbjct: 93   NYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSGRSKSPVKAGSSSSGG-- 150

Query: 991  XXXXXXXXGCIATINNSSDVNNNVLMGGGHLPTTHQFPFLTSSLQHHHYYYNNNGDFGSR 812
                      +++   ++D+  N+      LP    FP L      HH    N+ D G  
Sbjct: 151  ----------LSSNGGTTDITGNMTTPPPLLPI---FPPL------HHLGDYNSPDIGLN 191

Query: 811  FGATNPTSSLVAKNIGNGSAHEFQIXXXXXXXXXXSLCLG----EQWRXXXXXXXXXXXX 644
            FG   P+   V    G G   EFQ+             L     EQWR            
Sbjct: 192  FGGILPS---VGATAGGGGGVEFQMENSTSSNSVGGSVLSSGLVEQWRLQQVQHQVQQ-- 246

Query: 643  XXXXXXXQFPFLTNLEPQIGLFQFXXXXXXXXXNI--IRSKAVDSTSVSTGILMPHQLNT 470
                    +PFL+NLEP  GL+ F             IRS+ +DST VS       QL +
Sbjct: 247  --------YPFLSNLEPSSGLYSFEGGGIGPSNYAGQIRSRPLDSTGVS-------QLAS 291

Query: 469  IKMEANNGQGQXXXXXXXXXXXXXXXXXXXXLFWNGSDGNNIINAWSEVPSFT-PSPSHL 293
            +KME N G                        +W G+      NAW+++P FT  S SHL
Sbjct: 292  VKMEGNQG---------LNLSRNFLGISGNDQYWGGN------NAWTDLPGFTSSSTSHL 336

Query: 292  L 290
            L
Sbjct: 337  L 337


>gb|AAO65880.1| putative DNA-binding protein [Oryza sativa Japonica Group]
            gi|108711798|gb|ABF99593.1| Dof domain, zinc finger
            family protein, expressed [Oryza sativa Japonica Group]
          Length = 355

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 1168 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC 1070
            NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC
Sbjct: 76   NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC 108


>gb|AFW67146.1| hypothetical protein ZEAMMB73_669483 [Zea mays]
          Length = 426

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 1168 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC 1070
            NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC
Sbjct: 135  NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC 167


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