BLASTX nr result

ID: Glycyrrhiza23_contig00000702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000702
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata...   175   4e-42
ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycin...   166   1e-39
ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arab...   166   2e-39
ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   165   3e-39
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      165   3e-39

>ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
           gi|297313481|gb|EFH43904.1| RNA-binding protein cp31
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  175 bits (443), Expect = 4e-42
 Identities = 98/151 (64%), Positives = 103/151 (68%)
 Frame = -3

Query: 455 VIYNRESDQSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKAXXXXXXXXXXXXXX 276
           VIYNRE+DQSRGFGFVTMSTVEEAE AVEKFNRYD +GRLLTVNKA              
Sbjct: 158 VIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVY 217

Query: 275 XPALRVYVGNLPWDVXXXXXXXXXXXXXXXXXXXGNLPWDVDNTRLEQVFSEHGKVLRAQ 96
            PA RVYVGNLP                          WDVDN RLEQVFSEHGKV+ A+
Sbjct: 218 EPAFRVYVGNLP--------------------------WDVDNGRLEQVFSEHGKVVEAR 251

Query: 95  VVSDRETGRSRGFGFVTMSNETEMNDAIAAL 3
           VV DRETGRSRGFGFVTMSNE E+NDAIAAL
Sbjct: 252 VVYDRETGRSRGFGFVTMSNENELNDAIAAL 282



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -3

Query: 173 GNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAI 12
           GNL +DVD+  L  +F + G V  A+V+ +RET +SRGFGFVTMS   E   A+
Sbjct: 132 GNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAV 185


>ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
           gi|255644452|gb|ACU22730.1| unknown [Glycine max]
          Length = 290

 Score =  166 bits (421), Expect = 1e-39
 Identities = 92/153 (60%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
 Frame = -3

Query: 455 VIYNRESDQSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKA--XXXXXXXXXXXX 282
           VIYNRE+DQSRGFGFVTMSTVEEAE AVEKFNRYD DGRLLTVNKA              
Sbjct: 140 VIYNRETDQSRGFGFVTMSTVEEAESAVEKFNRYDIDGRLLTVNKASPRGTRPERPPPRR 199

Query: 281 XXXPALRVYVGNLPWDVXXXXXXXXXXXXXXXXXXXGNLPWDVDNTRLEQVFSEHGKVLR 102
               +L +YVGNLP                          WDVDNTRL+Q+FS+HG V+ 
Sbjct: 200 SFESSLSIYVGNLP--------------------------WDVDNTRLKQIFSKHGNVVN 233

Query: 101 AQVVSDRETGRSRGFGFVTMSNETEMNDAIAAL 3
           A+VV DRE+GRSRGFGFVTMS+ETEMNDA+AAL
Sbjct: 234 ARVVYDRESGRSRGFGFVTMSDETEMNDAVAAL 266



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = -3

Query: 173 GNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAI 12
           GNLP+DVD+ +L  +F + G V  A+V+ +RET +SRGFGFVTMS   E   A+
Sbjct: 114 GNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAESAV 167


>ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
           lyrata] gi|297311615|gb|EFH42039.1| hypothetical protein
           ARALYDRAFT_918033 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  166 bits (420), Expect = 2e-39
 Identities = 91/151 (60%), Positives = 102/151 (67%)
 Frame = -3

Query: 455 VIYNRESDQSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKAXXXXXXXXXXXXXX 276
           VIYNR++DQSRGFGFVTMSTVEEA++AVEKFNRY+ +GRLLTVN A              
Sbjct: 144 VIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRPERQPRQY 203

Query: 275 XPALRVYVGNLPWDVXXXXXXXXXXXXXXXXXXXGNLPWDVDNTRLEQVFSEHGKVLRAQ 96
             A R+YVGNLP                          WDVDN RL+QVFSEHGKV+ A+
Sbjct: 204 DAAFRIYVGNLP--------------------------WDVDNDRLQQVFSEHGKVVDAR 237

Query: 95  VVSDRETGRSRGFGFVTMSNETEMNDAIAAL 3
           VV DRETGRSRGFGFVTMSNE E+NDAIAAL
Sbjct: 238 VVYDRETGRSRGFGFVTMSNENEVNDAIAAL 268



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = -3

Query: 173 GNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAI 12
           GNLP+DVD+  L  +F + G V  ++V+ +R+T +SRGFGFVTMS   E   A+
Sbjct: 118 GNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAV 171


>ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 305

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/153 (60%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
 Frame = -3

Query: 455 VIYNRESDQSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKA--XXXXXXXXXXXX 282
           VIYNRE+DQSRGFGFVTMSTVEEAE AVEKF+RYD+DGRLLTVNKA              
Sbjct: 155 VIYNRETDQSRGFGFVTMSTVEEAENAVEKFSRYDFDGRLLTVNKASPRGTRPERPPPRH 214

Query: 281 XXXPALRVYVGNLPWDVXXXXXXXXXXXXXXXXXXXGNLPWDVDNTRLEQVFSEHGKVLR 102
              P+L +YVGNLP                          WDVDNTRLEQ+FSEHG V+ 
Sbjct: 215 SFEPSLSIYVGNLP--------------------------WDVDNTRLEQIFSEHGNVVN 248

Query: 101 AQVVSDRETGRSRGFGFVTMSNETEMNDAIAAL 3
           A+VV DRET RSRGFGFVTMS+ETEM DA+AAL
Sbjct: 249 ARVVYDRETRRSRGFGFVTMSDETEMKDAVAAL 281



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = -3

Query: 173 GNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAI 12
           GNLP+DVD+ +L  +F + G V  A+V+ +RET +SRGFGFVTMS   E  +A+
Sbjct: 129 GNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAENAV 182


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  165 bits (418), Expect = 3e-39
 Identities = 92/151 (60%), Positives = 102/151 (67%)
 Frame = -3

Query: 455 VIYNRESDQSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKAXXXXXXXXXXXXXX 276
           VIYNRE+DQSRGFGFVTMSTVEEAE+AVE FNRYD +GRLLTVNKA              
Sbjct: 152 VIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAF 211

Query: 275 XPALRVYVGNLPWDVXXXXXXXXXXXXXXXXXXXGNLPWDVDNTRLEQVFSEHGKVLRAQ 96
            PA R+YVGNLP                          W VD+ RLEQVFSEHGKV+ A+
Sbjct: 212 EPAFRMYVGNLP--------------------------WQVDDARLEQVFSEHGKVVEAR 245

Query: 95  VVSDRETGRSRGFGFVTMSNETEMNDAIAAL 3
           VV DRETGRSRGFGFVTMS +TE++DAIAAL
Sbjct: 246 VVYDRETGRSRGFGFVTMSTQTELDDAIAAL 276



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = -3

Query: 173 GNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAI 12
           GNLP+DVD+  L ++F + G V  A+V+ +RET +SRGFGFVTMS   E   A+
Sbjct: 126 GNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAV 179


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