BLASTX nr result

ID: Glycyrrhiza23_contig00000682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000682
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44960.1| unknown [Medicago truncatula]                          127   2e-27
ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...   124   1e-26
ref|NP_001240010.1| uncharacterized protein LOC100811078 [Glycin...   121   7e-26
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...   120   1e-25
gb|ABK94240.1| unknown [Populus trichocarpa]                          120   1e-25

>gb|AFK44960.1| unknown [Medicago truncatula]
          Length = 148

 Score =  127 bits (318), Expect = 2e-27
 Identities = 77/136 (56%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
 Frame = +3

Query: 168 GFVFSLNVGXXXXXXXXXXN--MLMFPLSKYN-NNNTSRLVVRXXXXXXXXXXXXXXXXX 338
           GF+ SLNV              MLMFPL   N  +++SRLVVR                 
Sbjct: 12  GFLLSLNVAANSTTSSASSRSTMLMFPLKSNNIGSSSSRLVVRATDEAAPAAPAAPAAPA 71

Query: 339 XXXXXXXXXXXXXXX-KRGTKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNY 515
                           KRG+KVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRF KVNY
Sbjct: 72  ADAAPTPKPKPPPIGPKRGSKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFQKVNY 131

Query: 516 ANVSTNNYALDEIEEV 563
           ANVSTNNYALDEIEEV
Sbjct: 132 ANVSTNNYALDEIEEV 147


>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score =  124 bits (311), Expect = 1e-26
 Identities = 71/114 (62%), Positives = 75/114 (65%)
 Frame = +3

Query: 225 NMLMFPLSKYNNNNTSRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGTKVK 404
           NM+ FP SK NN N SRLVVR                                KRGTKVK
Sbjct: 30  NMVYFP-SKNNNINNSRLVVRAAEEAAAPAPATTTAPAEGEAPKPKPPPIGP-KRGTKVK 87

Query: 405 ILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVE 566
           ILR+ESYWY G GSVVAVDQDPKTRYPVVVRF+KVNYANVSTNNYALDEIEEV+
Sbjct: 88  ILRRESYWYNGIGSVVAVDQDPKTRYPVVVRFDKVNYANVSTNNYALDEIEEVK 141


>ref|NP_001240010.1| uncharacterized protein LOC100811078 [Glycine max]
           gi|255638239|gb|ACU19433.1| unknown [Glycine max]
          Length = 129

 Score =  121 bits (304), Expect = 7e-26
 Identities = 75/133 (56%), Positives = 77/133 (57%)
 Frame = +3

Query: 168 GFVFSLNVGXXXXXXXXXXNMLMFPLSKYNNNNTSRLVVRXXXXXXXXXXXXXXXXXXXX 347
           GFV SLNV            ++MF       NN SRLVVR                    
Sbjct: 7   GFVLSLNVAAATTNS----RVVMFN----TKNNASRLVVRASDEPAAAAPATATPPAEAE 58

Query: 348 XXXXXXXXXXXXKRGTKVKILRKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVS 527
                       KRG KVKILRKESYWYKGTGSVVAVDQDP TRYPVVVRFNKVNYANVS
Sbjct: 59  AKPKPPPIGP--KRGAKVKILRKESYWYKGTGSVVAVDQDPNTRYPVVVRFNKVNYANVS 116

Query: 528 TNNYALDEIEEVE 566
           TNNYALDEI EVE
Sbjct: 117 TNNYALDEIVEVE 129


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score =  120 bits (302), Expect = 1e-25
 Identities = 67/112 (59%), Positives = 73/112 (65%)
 Frame = +3

Query: 231 LMFPLSKYNNNNTSRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGTKVKIL 410
           ++F  SK NN N SRLVVR                                KRGTKVKIL
Sbjct: 31  MLFFSSKNNNKNYSRLVVRSAEEGASPPAATTEPAVAEAPKPKPPPIGP--KRGTKVKIL 88

Query: 411 RKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVE 566
           RKESYW+ G GSVVAVDQDP++RYPVVVRFNKVNYANVSTNNYALDEIEEV+
Sbjct: 89  RKESYWFNGVGSVVAVDQDPRSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 140


>gb|ABK94240.1| unknown [Populus trichocarpa]
          Length = 110

 Score =  120 bits (302), Expect = 1e-25
 Identities = 67/112 (59%), Positives = 73/112 (65%)
 Frame = +3

Query: 231 LMFPLSKYNNNNTSRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGTKVKIL 410
           ++F  SK NN N SRLVVR                                KRGTKVKIL
Sbjct: 1   MLFFSSKNNNKNYSRLVVRSAEEGASPPAATTEPAVAEAPKPKPPPIGP--KRGTKVKIL 58

Query: 411 RKESYWYKGTGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVE 566
           RKESYW+ G GSVVAVDQDP++RYPVVVRFNKVNYANVSTNNYALDEIEEV+
Sbjct: 59  RKESYWFNGVGSVVAVDQDPRSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 110


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