BLASTX nr result

ID: Glycyrrhiza23_contig00000577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000577
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37078.1| unknown [Lotus japonicus]                              286   e-106
ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   295   e-105
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK...   288   e-105
ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4...   283   e-104
ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P...   275   e-102

>gb|AFK37078.1| unknown [Lotus japonicus]
          Length = 252

 Score =  286 bits (732), Expect(2) = e-106
 Identities = 133/145 (91%), Positives = 141/145 (97%)
 Frame = +1

Query: 526 GMLLPEVFTKMGVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 705
           GMLLPEV T +G++NVPKWYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN
Sbjct: 108 GMLLPEVLTNIGLINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 167

Query: 706 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGK 885
           QDPIFKQYSLPPNEVGYPGGIFNPLNFAPT EAKE+E+ANGRLAMLAFLGF+VQHNVTGK
Sbjct: 168 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTEEAKERELANGRLAMLAFLGFIVQHNVTGK 227

Query: 886 GPFDNLLQHLSDPWHSTIIQTLSGN 960
           GPFDNLLQHLSDPWH+TI+QTLSGN
Sbjct: 228 GPFDNLLQHLSDPWHNTIVQTLSGN 252



 Score =  126 bits (316), Expect(2) = e-106
 Identities = 63/84 (75%), Positives = 68/84 (80%)
 Frame = +3

Query: 168 LLNMATHASATLSRPCAPKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVRAKKGEWLP 347
           +  + T ASA + RPCA +SRFLTGSS KLNREVA   RPMG P  TSFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCASRSRFLTGSSGKLNREVAF--RPMGCPPSTSFKVEAKKGEWLP 58

Query: 348 GLASPSYLNGSLPGDNGFDPLGLA 419
           GLASP+YLNGSLPGDNGFDPL LA
Sbjct: 59  GLASPNYLNGSLPGDNGFDPLALA 82


>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  295 bits (756), Expect(2) = e-105
 Identities = 137/145 (94%), Positives = 144/145 (99%)
 Frame = +1

Query: 526 GMLLPEVFTKMGVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 705
           GMLLPEVFTK+G++NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN
Sbjct: 107 GMLLPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 166

Query: 706 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGK 885
           QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGF++QHNVTGK
Sbjct: 167 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGK 226

Query: 886 GPFDNLLQHLSDPWHSTIIQTLSGN 960
           GPFDNLLQHLSDPWH+TIIQT SGN
Sbjct: 227 GPFDNLLQHLSDPWHNTIIQTFSGN 251



 Score =  115 bits (288), Expect(2) = e-105
 Identities = 60/84 (71%), Positives = 67/84 (79%)
 Frame = +3

Query: 168 LLNMATHASATLSRPCAPKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVRAKKGEWLP 347
           +  + T ASA + RPCA KSRFL+GS +KLNREVA   +PM S S  SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLSGSPSKLNREVAF--KPMSS-SPASFKVEAKKGEWLP 57

Query: 348 GLASPSYLNGSLPGDNGFDPLGLA 419
           GL SP+YLNGSLPGDNGFDPLGLA
Sbjct: 58  GLPSPAYLNGSLPGDNGFDPLGLA 81


>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  288 bits (738), Expect(2) = e-105
 Identities = 134/145 (92%), Positives = 142/145 (97%)
 Frame = +1

Query: 526 GMLLPEVFTKMGVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 705
           GMLLPEVFT +G++NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN
Sbjct: 108 GMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 167

Query: 706 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGK 885
           QDPIFKQYSLP  EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGF++QHNVTGK
Sbjct: 168 QDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGK 227

Query: 886 GPFDNLLQHLSDPWHSTIIQTLSGN 960
           GPFDNLLQHLSDPWH+TI+QTLSG+
Sbjct: 228 GPFDNLLQHLSDPWHNTIVQTLSGS 252



 Score =  121 bits (303), Expect(2) = e-105
 Identities = 61/84 (72%), Positives = 65/84 (77%)
 Frame = +3

Query: 168 LLNMATHASATLSRPCAPKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVRAKKGEWLP 347
           +  + T ASA + RPC  KSRFLTGSS KLNREVA+  RPMG     SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCGLKSRFLTGSSGKLNREVAI--RPMGCSPSASFKVEAKKGEWLP 58

Query: 348 GLASPSYLNGSLPGDNGFDPLGLA 419
           GLASP YL GSLPGDNGFDPLGLA
Sbjct: 59  GLASPGYLTGSLPGDNGFDPLGLA 82


>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|147843386|emb|CAN79984.1| hypothetical
           protein VITISV_038035 [Vitis vinifera]
          Length = 252

 Score =  283 bits (723), Expect(2) = e-104
 Identities = 131/144 (90%), Positives = 139/144 (96%)
 Frame = +1

Query: 526 GMLLPEVFTKMGVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 705
           GMLLPEVFTK+G++N P+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN
Sbjct: 108 GMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 167

Query: 706 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGK 885
           QDPIFK YSLPPNEVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGF+VQHNVTGK
Sbjct: 168 QDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGK 227

Query: 886 GPFDNLLQHLSDPWHSTIIQTLSG 957
           GPFDNLLQH+SDPWH+TIIQTL G
Sbjct: 228 GPFDNLLQHISDPWHNTIIQTLRG 251



 Score =  123 bits (308), Expect(2) = e-104
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +3

Query: 168 LLNMATHASATLSRPCAPKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVRAKKGEWLP 347
           +  + T ASA + RPCA KSRFLTGSS KL REV  SV+PM S S+ SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREV--SVKPMTSSSYRSFKVEAKKGEWLP 58

Query: 348 GLASPSYLNGSLPGDNGFDPLGLA 419
           GL+SPSYL+GSLPGDNGFDPLGLA
Sbjct: 59  GLSSPSYLDGSLPGDNGFDPLGLA 82


>ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  275 bits (702), Expect(2) = e-102
 Identities = 126/144 (87%), Positives = 137/144 (95%)
 Frame = +1

Query: 526 GMLLPEVFTKMGVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 705
           GMLLPEVFTK+G++N P+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN
Sbjct: 108 GMLLPEVFTKIGIINAPQWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 167

Query: 706 QDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGK 885
           QDPIFKQYSLP +E GYPG +FNPLNFAPTLEAKEKE+ANGRLAMLAFLGF+VQHNVTGK
Sbjct: 168 QDPIFKQYSLPQHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGK 227

Query: 886 GPFDNLLQHLSDPWHSTIIQTLSG 957
           GPF+NLLQHLSDPWH+TII T+ G
Sbjct: 228 GPFENLLQHLSDPWHNTIINTIRG 251



 Score =  126 bits (316), Expect(2) = e-102
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +3

Query: 168 LLNMATHASATLSRPCAPKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVRAKKGEWLP 347
           +  + T ASA + RPCA KSRFLTGSS KLNREV  ++RPMG P   SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCASKSRFLTGSSGKLNREV--TMRPMGCPPSASFKVEAKKGEWLP 58

Query: 348 GLASPSYLNGSLPGDNGFDPLGLA 419
           GLASP+YLNG+LPGDNGFDPLGLA
Sbjct: 59  GLASPTYLNGTLPGDNGFDPLGLA 82


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