BLASTX nr result

ID: Glycyrrhiza23_contig00000563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000563
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...   615   e-173
ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glyc...   577   e-162
ref|XP_003526610.1| PREDICTED: biotin--protein ligase-like [Glyc...   560   e-157
ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
emb|CBI19072.3| unnamed protein product [Vitis vinifera]              493   e-137

>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
            gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
            hcs2 [Medicago truncatula]
          Length = 361

 Score =  615 bits (1586), Expect = e-173
 Identities = 303/363 (83%), Positives = 328/363 (90%)
 Frame = +2

Query: 542  MVLLNPALAVSSSLLVTTRRLYNYHTTTSTFMASSAVDCTLLVLCGKSLAENETAMAIKT 721
            MVLLN A + +S LL TTRR+YNYH +T T MASSAVDC+LLVLCGKSLAENETA+AIKT
Sbjct: 1    MVLLNSA-STASLLLATTRRVYNYHLSTYTLMASSAVDCSLLVLCGKSLAENETAIAIKT 59

Query: 722  DNTLKLPDKGELSLVLHSEFNKXXXXXXXXXXXXXXMASLSTDQFGRLLIWSPRLTSTHD 901
            +NTLKLPDK ELS++LHSEFNK              M SLST+QFGRLLIWSP LTSTHD
Sbjct: 60   NNTLKLPDKKELSIILHSEFNKSVIQRQSFQFSSF-MNSLSTNQFGRLLIWSPELTSTHD 118

Query: 902  VVSHNFCELPIGTVCVADIQTKGRGRSKNVWESPSGCLMFSFILQMEDGRVLPLVQYVVS 1081
            VVSHNFCELP+GTVCV DIQ KGRGRSKN WESP GCLMFSF LQMEDGR++PLVQYVVS
Sbjct: 119  VVSHNFCELPVGTVCVGDIQNKGRGRSKNAWESPLGCLMFSFTLQMEDGRIVPLVQYVVS 178

Query: 1082 LAITEAIKDMCDKNGLPCIDVKIKWPNDLYLNGSKVGGVLCTSTYKSKKFNVSVGIGLNV 1261
            LAITEAIKD+CDKNGLPC+DVKIKWPNDLYLNG KVGG+LCTSTY+SKKFN+S GIGLNV
Sbjct: 179  LAITEAIKDICDKNGLPCVDVKIKWPNDLYLNGFKVGGILCTSTYRSKKFNISAGIGLNV 238

Query: 1262 SNEKPTTSLNTVLRELNVGAYQFQREDVLAAFFNQFEKFYGLFANQGFQTLEELYYKTWL 1441
            +NEKPTTSLNTVLREL+VGAYQFQREDVLAAFFN+FEKF+ LF NQGFQTLEELYYKTWL
Sbjct: 239  NNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEKFFDLFLNQGFQTLEELYYKTWL 298

Query: 1442 HSGQRVVVQEKNEDKVVEHVVTIQGLTSSGYLLAVGDDSQMCELHPDGNSFDFFKGLVRR 1621
            HSGQRV+VQEKNE+KVVEH VTIQGLTSSGYLLAVGDD+QMCELHPDGNSFDFFKGLVRR
Sbjct: 299  HSGQRVIVQEKNEEKVVEHAVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRR 358

Query: 1622 KLD 1630
            KLD
Sbjct: 359  KLD 361


>ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glycine max]
          Length = 361

 Score =  577 bits (1488), Expect = e-162
 Identities = 290/364 (79%), Positives = 320/364 (87%), Gaps = 1/364 (0%)
 Frame = +2

Query: 542  MVLLNPALAVSSSLLVTTRRLYNY-HTTTSTFMASSAVDCTLLVLCGKSLAENETAMAIK 718
            M+L NPAL  +S L  TT++LYN+ ++T + FMASS V C+LLVLCGKSLAENETA AIK
Sbjct: 1    MLLRNPALT-ASLLSATTKKLYNHRYSTPAAFMASSGVACSLLVLCGKSLAENETAKAIK 59

Query: 719  TDNTLKLPDKGELSLVLHSEFNKXXXXXXXXXXXXXXMASLSTDQFGRLLIWSPRLTSTH 898
            T+NTLKLP+  +LSLVLHSE +K              M SLST+QFGRLL+WSP LTSTH
Sbjct: 60   TNNTLKLPEDEKLSLVLHSEMDKSVMQGFFQVHSY--MDSLSTNQFGRLLVWSPDLTSTH 117

Query: 899  DVVSHNFCELPIGTVCVADIQTKGRGRSKNVWESPSGCLMFSFILQMEDGRVLPLVQYVV 1078
            DVVSHNFCELPIGTVC+AD+QTKGRGRSKNVWESP GCLMFSF +QMEDGRV+PLVQYVV
Sbjct: 118  DVVSHNFCELPIGTVCIADVQTKGRGRSKNVWESPLGCLMFSFTMQMEDGRVVPLVQYVV 177

Query: 1079 SLAITEAIKDMCDKNGLPCIDVKIKWPNDLYLNGSKVGGVLCTSTYKSKKFNVSVGIGLN 1258
            SLA+TEAIKD+CDKNGLP IDVKIKWPNDLYLNGSKVGG+LCTSTYKSKKFNVS GIGLN
Sbjct: 178  SLAMTEAIKDICDKNGLPSIDVKIKWPNDLYLNGSKVGGILCTSTYKSKKFNVSAGIGLN 237

Query: 1259 VSNEKPTTSLNTVLRELNVGAYQFQREDVLAAFFNQFEKFYGLFANQGFQTLEELYYKTW 1438
            V+N+KPTTSLNT+L+    GAYQFQRE+VLAAFFN+FE FY LF NQGFQTLEELY KTW
Sbjct: 238  VNNKKPTTSLNTILKGFYSGAYQFQREEVLAAFFNKFEIFYDLFLNQGFQTLEELYIKTW 297

Query: 1439 LHSGQRVVVQEKNEDKVVEHVVTIQGLTSSGYLLAVGDDSQMCELHPDGNSFDFFKGLVR 1618
            LHSGQRVVVQEKNEDKV+EHVVTIQGLTSSGYLLAVGDD QMCELHPDGNSFDFFKGLVR
Sbjct: 298  LHSGQRVVVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDHQMCELHPDGNSFDFFKGLVR 357

Query: 1619 RKLD 1630
            RKL+
Sbjct: 358  RKLE 361


>ref|XP_003526610.1| PREDICTED: biotin--protein ligase-like [Glycine max]
          Length = 361

 Score =  560 bits (1442), Expect = e-157
 Identities = 282/363 (77%), Positives = 311/363 (85%), Gaps = 1/363 (0%)
 Frame = +2

Query: 542  MVLLNPALAVSSSLLVTTRRLYNYHTTT-STFMASSAVDCTLLVLCGKSLAENETAMAIK 718
            M+L NPAL  +S L  TT++L N+  +T +  MASS V C+LLVLCGKSLAENETA AIK
Sbjct: 1    MLLRNPALT-ASLLSATTKKLCNHRCSTPAALMASSGVACSLLVLCGKSLAENETAKAIK 59

Query: 719  TDNTLKLPDKGELSLVLHSEFNKXXXXXXXXXXXXXXMASLSTDQFGRLLIWSPRLTSTH 898
            T +TLKLP+  +LSLVLHSE +               M SLST+QFGRLLIWSP L STH
Sbjct: 60   TSSTLKLPEDEKLSLVLHSEMDNSVMQGFFQVHSY--MDSLSTNQFGRLLIWSPDLNSTH 117

Query: 899  DVVSHNFCELPIGTVCVADIQTKGRGRSKNVWESPSGCLMFSFILQMEDGRVLPLVQYVV 1078
            D+VSHNFCELPIGTV +AD+QTKGRGRSKNVWESP GCLMFSF +QMEDGRV+PLVQYVV
Sbjct: 118  DIVSHNFCELPIGTVSIADVQTKGRGRSKNVWESPLGCLMFSFTMQMEDGRVVPLVQYVV 177

Query: 1079 SLAITEAIKDMCDKNGLPCIDVKIKWPNDLYLNGSKVGGVLCTSTYKSKKFNVSVGIGLN 1258
            SLA+TEAIKD+CDKNGLP IDV+IKWPNDLYLNG KVGG+LCTSTYKSKKFNVS GIGLN
Sbjct: 178  SLAMTEAIKDICDKNGLPSIDVRIKWPNDLYLNGCKVGGILCTSTYKSKKFNVSAGIGLN 237

Query: 1259 VSNEKPTTSLNTVLRELNVGAYQFQREDVLAAFFNQFEKFYGLFANQGFQTLEELYYKTW 1438
            V+N+ PTTSLNT+L+    GAYQFQREDVLAAFFN+FEKFY LF NQGFQTLEELY KTW
Sbjct: 238  VNNKNPTTSLNTILKGFYTGAYQFQREDVLAAFFNKFEKFYDLFVNQGFQTLEELYIKTW 297

Query: 1439 LHSGQRVVVQEKNEDKVVEHVVTIQGLTSSGYLLAVGDDSQMCELHPDGNSFDFFKGLVR 1618
            LHSGQRVVVQEKNEDKV+EHVVTIQGLTSSGYLLAVGDD+ MCELHPDGNSFDFFKGLVR
Sbjct: 298  LHSGQRVVVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDNHMCELHPDGNSFDFFKGLVR 357

Query: 1619 RKL 1627
            RKL
Sbjct: 358  RKL 360


>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  498 bits (1283), Expect = e-138
 Identities = 248/332 (74%), Positives = 281/332 (84%), Gaps = 1/332 (0%)
 Frame = +2

Query: 638  ASSAVDCTLLVLCGKSLAENETAMAIKTDNTLKLPDKGELSLVLHSEF-NKXXXXXXXXX 814
            +SS+  C L VLCGKS AENE A ++  +NTLKLPD  ++S +LHSE  NK         
Sbjct: 3    SSSSTPCKL-VLCGKSSAENEIAKSLMNNNTLKLPDNVQVSTLLHSEIINKQQRQDEESF 61

Query: 815  XXXXXMASLSTDQFGRLLIWSPRLTSTHDVVSHNFCELPIGTVCVADIQTKGRGRSKNVW 994
                 M SLST+QFGRLLIWSP L STHDVVS+NF ELPIGTVCVAD+Q KGRGRSKNVW
Sbjct: 62   CIERFMNSLSTNQFGRLLIWSPILPSTHDVVSNNFGELPIGTVCVADVQYKGRGRSKNVW 121

Query: 995  ESPSGCLMFSFILQMEDGRVLPLVQYVVSLAITEAIKDMCDKNGLPCIDVKIKWPNDLYL 1174
            ESP+GCLMFSF +QMEDGRV+PL+QYVVSLA+TEAIKD+CDKNGLP IDV+IKWPNDLYL
Sbjct: 122  ESPAGCLMFSFTIQMEDGRVVPLLQYVVSLAVTEAIKDVCDKNGLPRIDVRIKWPNDLYL 181

Query: 1175 NGSKVGGVLCTSTYKSKKFNVSVGIGLNVSNEKPTTSLNTVLRELNVGAYQFQREDVLAA 1354
            NG KVGG+L TSTYKSKKFNVS GIGLNV NEKPTT LN VLREL+  A   +RED++AA
Sbjct: 182  NGLKVGGILSTSTYKSKKFNVSTGIGLNVDNEKPTTCLNAVLRELSAAACTLRREDIVAA 241

Query: 1355 FFNQFEKFYGLFANQGFQTLEELYYKTWLHSGQRVVVQEKNEDKVVEHVVTIQGLTSSGY 1534
            F N+FE FY LF N GFQTLEELYYKTWLHSGQRV++QEKNE++VVE+VVTIQGLTSSGY
Sbjct: 242  FLNKFENFYDLFINGGFQTLEELYYKTWLHSGQRVIIQEKNENQVVENVVTIQGLTSSGY 301

Query: 1535 LLAVGDDSQMCELHPDGNSFDFFKGLVRRKLD 1630
            LLA+G+D+QMCELHPDGNSFDFFKGLVRRKL+
Sbjct: 302  LLAIGEDNQMCELHPDGNSFDFFKGLVRRKLE 333


>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  493 bits (1268), Expect = e-137
 Identities = 242/332 (72%), Positives = 274/332 (82%)
 Frame = +2

Query: 635  MASSAVDCTLLVLCGKSLAENETAMAIKTDNTLKLPDKGELSLVLHSEFNKXXXXXXXXX 814
            +A  +   +LLVLCGKS AE E A ++K  NTLKLPD GE+S++LH E  K         
Sbjct: 88   LAMDSQSTSLLVLCGKSSAEIEFAKSLKAKNTLKLPDNGEVSILLHPEIEKPEEEPFQMD 147

Query: 815  XXXXXMASLSTDQFGRLLIWSPRLTSTHDVVSHNFCELPIGTVCVADIQTKGRGRSKNVW 994
                 M+SLST+ FGR LIWSP+L STHDVVS NFCELPIGTVCVAD+Q KGRGRSKN W
Sbjct: 148  LF---MSSLSTNTFGRFLIWSPQLPSTHDVVSQNFCELPIGTVCVADVQLKGRGRSKNKW 204

Query: 995  ESPSGCLMFSFILQMEDGRVLPLVQYVVSLAITEAIKDMCDKNGLPCIDVKIKWPNDLYL 1174
            ESP GCL+FSF LQMEDGR +PL+QYVVSLAITEAIK +CD  GLP +DVKIKWPNDLYL
Sbjct: 205  ESPRGCLLFSFTLQMEDGRTVPLLQYVVSLAITEAIKSICDSKGLPHLDVKIKWPNDLYL 264

Query: 1175 NGSKVGGVLCTSTYKSKKFNVSVGIGLNVSNEKPTTSLNTVLRELNVGAYQFQREDVLAA 1354
            NG KVGG+LCTSTYKS+KFNVS GIGLNV NEKPTT LN VLREL+  AYQF+RED++AA
Sbjct: 265  NGLKVGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAA 324

Query: 1355 FFNQFEKFYGLFANQGFQTLEELYYKTWLHSGQRVVVQEKNEDKVVEHVVTIQGLTSSGY 1534
            FFN+FE F+ LF NQGFQTLEELY KTWLHSGQRV+VQE  E ++VE+VVTIQGL SSGY
Sbjct: 325  FFNKFETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQENIEGQMVENVVTIQGLASSGY 384

Query: 1535 LLAVGDDSQMCELHPDGNSFDFFKGLVRRKLD 1630
            LLA+GDD QMCELHPDGNSFDFFKGL+RRKL+
Sbjct: 385  LLAIGDDGQMCELHPDGNSFDFFKGLIRRKLE 416


Top