BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000483
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   536   e-150
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   453   e-125
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   451   e-124
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   385   e-104
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              363   3e-98

>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  536 bits (1380), Expect = e-150
 Identities = 270/372 (72%), Positives = 293/372 (78%)
 Frame = +2

Query: 2    SGIKNFKTDPESNSSNGLEDVHGNGSESEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQK 181
            SGIK FKTDP+SN SN  ED H NGSESEKKGQ N                  LG DAQK
Sbjct: 1283 SGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQK 1342

Query: 182  RKQQGTDEVDYEDGPEEEMHXXXXXXXXXXXXXXXXXXXXXXXXXXVTLEANNSQGLESP 361
            RK QGTDEVDYEDGPEEE H                             +ANNS+GLE P
Sbjct: 1343 RKLQGTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDANENYNNVT--DANNSEGLEKP 1400

Query: 362  SKPKSIDEKDSLKAEKRKSGPTRKKYDRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQRA 541
            SK K+IDEK +LK EK+KS PT KKYDRA+FV+A+G HFEIHF+FT EPHILL QIAQR 
Sbjct: 1401 SKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRT 1460

Query: 542  AKKVCIQNFGKVGECKAITCKESGVIYYGEDDSKRNDIPSSVKEKIPALQTSGVHFETFW 721
            AKKVCIQNFGKVGECKAITCKESGVIYYG+D  KR +I +S KE+IPALQTSGVHF+TFW
Sbjct: 1461 AKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTFW 1520

Query: 722  EMQDDLDARHVYSNNVHAMLMAYGVEAARETIIREIQNVFKSYGISVNIRHLTLIADFMT 901
            E++DDLD R++YSNNVHAML AYGVEAARETIIRE+QNVFKSYGISVNIRHLTLIADFMT
Sbjct: 1521 ELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMT 1580

Query: 902  HSGGYRPMNRMGSIADSTSPFIKMCFETASKFIVEAACHGQVDNLDTPSSRICLGLPVKM 1081
            H+G YRPMNR GSIADSTSPFIKMCFETA  FIVEAA HGQVDNL+TPS+RICLGLPVKM
Sbjct: 1581 HTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKM 1640

Query: 1082 GTGCHDLIQKLE 1117
            GTGCHDLIQKLE
Sbjct: 1641 GTGCHDLIQKLE 1652


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA190-like [Glycine max]
          Length = 1568

 Score =  453 bits (1166), Expect = e-125
 Identities = 245/374 (65%), Positives = 274/374 (73%), Gaps = 2/374 (0%)
 Frame = +2

Query: 2    SGIKNFKTDPESNSSNGLEDVHGNGSESEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQK 181
            SGIK  K  P+SN SN  ED H NGSESEKKGQ+N                  LG DAQK
Sbjct: 1227 SGIKKIKDRPQSNYSNSSEDAHDNGSESEKKGQSNDEDDDGVVVEDTEGNED-LGSDAQK 1285

Query: 182  RKQQGTDEVDYEDGPEEEMHXXXXXXXXXXXXXXXXXXXXXXXXXXVTLEANNSQGLESP 361
            RK QGTDEVDYEDGPEEE H                             E + + G E  
Sbjct: 1286 RKLQGTDEVDYEDGPEEETHDG---------------------------ELSGNXGDEDG 1318

Query: 362  SKPKSIDEKDS--LKAEKRKSGPTRKKYDRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQ 535
            S    ++E D+  LK EK+KS PT K+YD A+FV+A+GMHFEIHF+FT EPHILL QI Q
Sbjct: 1319 SDV-DVNENDNNKLKREKKKSEPT-KRYDWAIFVEAKGMHFEIHFRFTGEPHILLTQIVQ 1376

Query: 536  RAAKKVCIQNFGKVGECKAITCKESGVIYYGEDDSKRNDIPSSVKEKIPALQTSGVHFET 715
            R AKK C+QNFGKVGECKAITCKESGVIYYG+DD K ++I +  KE+IPALQTSGVHF+T
Sbjct: 1377 RTAKKFCLQNFGKVGECKAITCKESGVIYYGKDDRKGDEISAFEKEEIPALQTSGVHFKT 1436

Query: 716  FWEMQDDLDARHVYSNNVHAMLMAYGVEAARETIIREIQNVFKSYGISVNIRHLTLIADF 895
            FWE++DDLD R++YSNNV AML AYGVEAARETIIRE+QNVF    ISVNIRHL L ADF
Sbjct: 1437 FWELEDDLDVRYIYSNNVLAMLNAYGVEAARETIIREVQNVF---XISVNIRHLKLNADF 1493

Query: 896  MTHSGGYRPMNRMGSIADSTSPFIKMCFETASKFIVEAACHGQVDNLDTPSSRICLGLPV 1075
            MTHSGGY  MNR GSIADSTS FIKMCFETA+KFIVEAA HGQVDNL+TPS+RIC+GLPV
Sbjct: 1494 MTHSGGYCLMNRTGSIADSTSLFIKMCFETAAKFIVEAAYHGQVDNLETPSARICIGLPV 1553

Query: 1076 KMGTGCHDLIQKLE 1117
            KMGTGCHDLIQKLE
Sbjct: 1554 KMGTGCHDLIQKLE 1567


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  451 bits (1161), Expect = e-124
 Identities = 239/373 (64%), Positives = 274/373 (73%), Gaps = 1/373 (0%)
 Frame = +2

Query: 2    SGIKNFKTDPESNSSNGLEDVHGNGSESEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQK 181
            SGIK+F+   +SNSSNGL++ H N S S + GQ +                   G DAQK
Sbjct: 1269 SGIKDFQG--KSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEED-----GFDAQK 1321

Query: 182  RKQQGTDEVDYEDGPEEEMHXXXXXXXXXXXXXXXXXXXXXXXXXXVTLEANNSQG-LES 358
             KQ+ TDEVDY+DGPEEE H                            +E N     +E 
Sbjct: 1322 SKQRATDEVDYDDGPEEETHDGEKSEDVEVSEDGKDDEDDNG------VEVNGDDSDIEV 1375

Query: 359  PSKPKSIDEKDSLKAEKRKSGPTRKKYDRAVFVKAEGMHFEIHFKFTDEPHILLAQIAQR 538
                K++  +++ K++KRK  P  KKYDR V+VKA GM FEIHFKF  EPHILLAQIAQR
Sbjct: 1376 NDSDKNVTLEETSKSKKRKFEPASKKYDRRVYVKAGGMRFEIHFKFIGEPHILLAQIAQR 1435

Query: 539  AAKKVCIQNFGKVGECKAITCKESGVIYYGEDDSKRNDIPSSVKEKIPALQTSGVHFETF 718
             A+KVCIQNFGKVG+CKAITCKESGVIYYGEDDSKR+DIPSSVKEKIPALQTSG+HF+TF
Sbjct: 1436 TAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPALQTSGIHFKTF 1495

Query: 719  WEMQDDLDARHVYSNNVHAMLMAYGVEAARETIIREIQNVFKSYGISVNIRHLTLIADFM 898
            WEM+DDL  R+VYSN+VHA+L AYGVEAA+E IIRE+QNVFKSYGISVNIRHL LIADFM
Sbjct: 1496 WEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNIRHLMLIADFM 1555

Query: 899  THSGGYRPMNRMGSIADSTSPFIKMCFETASKFIVEAACHGQVDNLDTPSSRICLGLPVK 1078
            THSG YRP+ R G IADSTSPF+K+ +ETAS FIVEAA HGQVD L+TPSSRICLGLPVK
Sbjct: 1556 THSGSYRPLTRSG-IADSTSPFVKISYETASNFIVEAARHGQVDTLETPSSRICLGLPVK 1614

Query: 1079 MGTGCHDLIQKLE 1117
            MGTGC DLIQKLE
Sbjct: 1615 MGTGCIDLIQKLE 1627


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  385 bits (988), Expect = e-104
 Identities = 210/390 (53%), Positives = 257/390 (65%), Gaps = 18/390 (4%)
 Frame = +2

Query: 2    SGIKNFKTDPESNSSNGL-EDVHGNGSESEKKGQANXXXXXXXXXXXXXXXXXXLGLDAQ 178
            SGIK+F  +  S +S    EDV G+ S  E++   N                  LGLDAQ
Sbjct: 1304 SGIKDFLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGERADD--------LGLDAQ 1355

Query: 179  KRKQQGTDEVDYEDGPEEEMHXXXXXXXXXXXXXXXXXXXXXXXXXX-----VTLEANNS 343
            KRK Q TDE+DY+DG EEE++                               +  EA+ +
Sbjct: 1356 KRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVMLDNEASET 1415

Query: 344  QGLESPSKPKSIDEKDSLKAEKRKSGPTRKK------------YDRAVFVKAEGMHFEIH 487
              L  PSKPKS  +     +   KS   +KK            +DRA+FV+A  MHFE+H
Sbjct: 1416 LPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVH 1475

Query: 488  FKFTDEPHILLAQIAQRAAKKVCIQNFGKVGECKAITCKESGVIYYGEDDSKRNDIPSSV 667
            FKFT+EPHILLA+IAQ+ AKKV IQN GK+ +C+   CKES VIYYG+D  +R D+   V
Sbjct: 1476 FKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDV 1535

Query: 668  KEKIPALQTSGVHFETFWEMQDDLDARHVYSNNVHAMLMAYGVEAARETIIREIQNVFKS 847
            KEK+PAL  +GV F TFW+MQD LD R++YSNN+HAML  YGVEAARETIIREI +VFKS
Sbjct: 1536 KEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKS 1595

Query: 848  YGISVNIRHLTLIADFMTHSGGYRPMNRMGSIADSTSPFIKMCFETASKFIVEAACHGQV 1027
            YGI+V+ RHL+LIADFMTH+GGYRPM+RMG IA+S SPF KM FETASKFIVEAA HG++
Sbjct: 1596 YGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEI 1655

Query: 1028 DNLDTPSSRICLGLPVKMGTGCHDLIQKLE 1117
            DNL+TPS+RICLGLPVKMGTG  DL+QKLE
Sbjct: 1656 DNLETPSARICLGLPVKMGTGSFDLMQKLE 1685


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  363 bits (933), Expect = 3e-98
 Identities = 201/384 (52%), Positives = 243/384 (63%), Gaps = 12/384 (3%)
 Frame = +2

Query: 2    SGIKNFKTDPESNSSNGLED-------VHGNGSES---EKKGQANXXXXXXXXXXXXXXX 151
            SGIKNF  D  S +S   ++         GNG E    E  G A                
Sbjct: 1303 SGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAED-------------- 1348

Query: 152  XXXLGLDAQKRKQQGTDEVDYEDGPEEEMHXXXXXXXXXXXXXXXXXXXXXXXXXXVTLE 331
               LGLDAQKRKQQ +DE+DY D  E E                            V + 
Sbjct: 1349 ---LGLDAQKRKQQASDEMDYGDS-EGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGIS 1404

Query: 332  ANNSQGLESPSKPKSIDEKDSLKAEKRKSG--PTRKKYDRAVFVKAEGMHFEIHFKFTDE 505
                +  + PSK KS   K +    KRK      +K +DRA+ VKA+G +FE+HF+FT+E
Sbjct: 1405 DPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1464

Query: 506  PHILLAQIAQRAAKKVCIQNFGKVGECKAITCKESGVIYYGEDDSKRNDIPSSVKEKIPA 685
            PHILLAQIAQ+AA KV I++ GK+  C+ I C +  VIYYG D  KR +IP   K+K+PA
Sbjct: 1465 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPA 1524

Query: 686  LQTSGVHFETFWEMQDDLDARHVYSNNVHAMLMAYGVEAARETIIREIQNVFKSYGISVN 865
            LQT+GV F  FW+MQD+LD R+VYSNNVHAML  +GVEAAR TII+E+ NVF +YG+ VN
Sbjct: 1525 LQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1584

Query: 866  IRHLTLIADFMTHSGGYRPMNRMGSIADSTSPFIKMCFETASKFIVEAACHGQVDNLDTP 1045
            IRHL+LIADFMTHSGGYRPMNR G IA+S SPF KM FETASKFIVEAA HG  DNL++ 
Sbjct: 1585 IRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESA 1644

Query: 1046 SSRICLGLPVKMGTGCHDLIQKLE 1117
            S+RICLGLPVKMGTGC DL+QK+E
Sbjct: 1645 SARICLGLPVKMGTGCFDLMQKIE 1668