BLASTX nr result

ID: Glycyrrhiza23_contig00000470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000470
         (2213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608854.1| Eukaryotic peptide chain release factor subu...   815   0.0  
ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ...   793   0.0  
ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release ...   783   0.0  
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   781   0.0  
ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   781   0.0  

>ref|XP_003608854.1| Eukaryotic peptide chain release factor subunit 1-1 [Medicago
            truncatula] gi|355509909|gb|AES91051.1| Eukaryotic
            peptide chain release factor subunit 1-1 [Medicago
            truncatula]
          Length = 549

 Score =  815 bits (2106), Expect = 0.0
 Identities = 423/569 (74%), Positives = 468/569 (82%)
 Frame = -2

Query: 2050 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1871
            MADAH+TDKNI VW           ARGNGTSMISLI+PPRDQI+RVTKML +E+GTASN
Sbjct: 1    MADAHDTDKNIGVWKIKQLMKNLEAARGNGTSMISLIIPPRDQISRVTKMLANEYGTASN 60

Query: 1870 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1691
            IKSRVNRQSVLGAI+SAQQRLKLYNKVPPNGLVLY GTI+T+D KEKK T DFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAISSAQQRLKLYNKVPPNGLVLYCGTILTDDEKEKKETFDFEPFRPIN 120

Query: 1690 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1511
            ASLYLCDNKFHTE LNE+LESDDK+GFIVMDGNGTLFGTLSGNTREVLHK++VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEPLNEILESDDKYGFIVMDGNGTLFGTLSGNTREVLHKYTVDLPKKHG 180

Query: 1510 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1331
            RGGQSALRFARLR EKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELS+S
Sbjct: 181  RGGQSALRFARLRTEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSKS 240

Query: 1330 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 1151
            DMFDPRLQAK+LNVVDVSYGGE GFNQAI+ S+EILSNVKFIQEK+LI KYFEEI QDTG
Sbjct: 241  DMFDPRLQAKLLNVVDVSYGGEMGFNQAIQQSSEILSNVKFIQEKRLIEKYFEEIGQDTG 300

Query: 1150 KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 971
            K V+GVDDTL+AL+ GAVETLIVWENLDMTRY LKNSTTGE+VIKH NK+QEA+QSNFRD
Sbjct: 301  KSVYGVDDTLQALDAGAVETLIVWENLDMTRYVLKNSTTGEIVIKHFNKQQEANQSNFRD 360

Query: 970  PGSSADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 791
            P +S+DYEVQE +SL+EWFANEYK+FGCTLE VTNKSQEGSQFC+GFGGIGG+LRYQLDM
Sbjct: 361  PENSSDYEVQEMLSLVEWFANEYKQFGCTLEIVTNKSQEGSQFCKGFGGIGGMLRYQLDM 420

Query: 790  RTFXXXXXXXXXXXXSE*QSMKSFPLLVQERKVKVPAPVWEXXXXXXXXXXXXXXXXXXX 611
            RTF                    F     ER+ K+PAPVWE                   
Sbjct: 421  RTF------------------DDFSDDGSEREAKIPAPVWE--VAARAAAAPPLPHMSVV 460

Query: 610  XPGKFDCESSCLALKVLSDRSDSLTCSHVFQYLALRISAILLATAGENLPFPTLVLSART 431
              GKFD + SC A KV S+RS  LTCS + +  AL+I+A LLATAGEN+ FP  ++SA  
Sbjct: 461  LHGKFDSKMSCFAPKVPSNRSYYLTCSPIIRSSALQITATLLATAGENMSFPPPLISACI 520

Query: 430  QKGKNEIMLPKEHYLAPMKSLLDLFVYVT 344
            Q  KN+++LPKEH LA  KSLL+L V VT
Sbjct: 521  QNCKNKVILPKEHNLASTKSLLNLSVDVT 549


>ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  793 bits (2049), Expect = 0.0
 Identities = 398/423 (94%), Positives = 406/423 (95%)
 Frame = -2

Query: 2050 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1871
            M D HETDKNIEVW           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1870 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1691
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 1690 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1511
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1510 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1331
            RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1330 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 1151
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1150 KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 971
            KYVFGVDDTLKALEMGAVETLIVWENLDM RY LKNS TGEVVIKHLNKEQ+ADQSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHLNKEQDADQSNFRD 360

Query: 970  PGSSADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 791
            P S+AD+EVQEK+SLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  PESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 790  RTF 782
            R+F
Sbjct: 421  RSF 423


>ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  783 bits (2023), Expect = 0.0
 Identities = 394/423 (93%), Positives = 404/423 (95%)
 Frame = -2

Query: 2050 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1871
            MADAH TDKNIEVW           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHGTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1870 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1691
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 1690 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1511
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1510 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1331
            RGGQSALRFARLRMEKRHNYVRKTAE ATQFYIN ATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGSADFKTELSQS 240

Query: 1330 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 1151
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1150 KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 971
            KYVFGVDDTLKALEMGAVETLIVWENLDM RY LKNS TGEVVIKH NKEQ+++QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHFNKEQDSNQSNFRD 360

Query: 970  PGSSADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 791
            P S+AD+EVQEK+SLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  PESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 790  RTF 782
            R+F
Sbjct: 421  RSF 423


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  781 bits (2017), Expect = 0.0
 Identities = 388/423 (91%), Positives = 407/423 (96%)
 Frame = -2

Query: 2050 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1871
            MADAHETDKNIE+W           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1870 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1691
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1690 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1511
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1510 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1331
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1330 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 1151
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1150 KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 971
            KYVFGVDDTLKALEMGAVE LIVWENLD+ RY LKN++TGE++IKHLNKEQEA+QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRD 360

Query: 970  PGSSADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 791
            P +S++ EVQEKM+LLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  PATSSELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 790  RTF 782
            R+F
Sbjct: 421  RSF 423


>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis
            vinifera]
          Length = 437

 Score =  781 bits (2016), Expect = 0.0
 Identities = 390/423 (92%), Positives = 406/423 (95%)
 Frame = -2

Query: 2050 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1871
            MAD HETDKNIE+W           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1870 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1691
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1690 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1511
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1510 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1331
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1330 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 1151
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1150 KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 971
            KYVFGVDDTLKALEMGAVETLIVWENLD++RY LKN+ TGE+VIKHLNKEQE++QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 970  PGSSADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 791
              +SA+ EVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 790  RTF 782
            R+F
Sbjct: 421  RSF 423


Top