BLASTX nr result

ID: Glycyrrhiza23_contig00000466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000466
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprot...   338   6e-91
gb|AFK40090.1| unknown [Lotus japonicus]                              327   2e-87
gb|AFK45487.1| unknown [Lotus japonicus]                              325   7e-87
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   325   7e-87
ref|XP_003548526.1| PREDICTED: U3 small nucleolar ribonucleoprot...   316   3e-84

>ref|XP_003536456.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max] gi|356575988|ref|XP_003556117.1|
           PREDICTED: U3 small nucleolar ribonucleoprotein protein
           IMP3-like [Glycine max] gi|255637789|gb|ACU19216.1|
           unknown [Glycine max]
          Length = 182

 Score =  338 bits (868), Expect = 6e-91
 Identities = 161/168 (95%), Positives = 167/168 (99%)
 Frame = +3

Query: 54  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 233
           VNFLEWKREGGHREN++MQRYHVTGRDDYKKYSGLC MVQKLVN+LKQMDPKDPFR+DMT
Sbjct: 15  VNFLEWKREGGHRENLIMQRYHVTGRDDYKKYSGLCHMVQKLVNILKQMDPKDPFRVDMT 74

Query: 234 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 413
           DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGH+
Sbjct: 75  DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 414 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 557
           RVGPETVTDPAFLVTRNMEDF+TWVDSSKIKRKVLQYNDKLDDYDLMN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 182


>gb|AFK40090.1| unknown [Lotus japonicus]
          Length = 182

 Score =  327 bits (838), Expect = 2e-87
 Identities = 157/168 (93%), Positives = 163/168 (97%)
 Frame = +3

Query: 54  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 233
           VNFLEWKREGGHREN+VMQRYHVTGRDDYKKYS LC MVQKLVN+LKQMDPKDP R+DMT
Sbjct: 15  VNFLEWKREGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQMDPKDPVRVDMT 74

Query: 234 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 413
           DKLLEKLYNMGVIPTRQSIT CE LTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV
Sbjct: 75  DKLLEKLYNMGVIPTRQSITQCEHLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 134

Query: 414 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 557
           RVGPETVTDPAFLVTRNMEDF+TWVDSSKIKRKVL+YNDKLDDYD+MN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLKYNDKLDDYDIMN 182


>gb|AFK45487.1| unknown [Lotus japonicus]
          Length = 182

 Score =  325 bits (833), Expect = 7e-87
 Identities = 156/168 (92%), Positives = 162/168 (96%)
 Frame = +3

Query: 54  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 233
           VNFLEWKREGGHREN+VMQRYHVTGRDDYKKYS LC MVQKLVN+LKQMDPKDP R+DMT
Sbjct: 15  VNFLEWKREGGHRENLVMQRYHVTGRDDYKKYSSLCGMVQKLVNILKQMDPKDPVRVDMT 74

Query: 234 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 413
           DKLLEKLYNMGVIPTRQSIT CE LTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV
Sbjct: 75  DKLLEKLYNMGVIPTRQSITQCEHLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 134

Query: 414 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 557
           RVGPETVTDPAFLVTRNMEDF+ WVDSSKIKRKVL+YNDKLDDYD+MN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVAWVDSSKIKRKVLKYNDKLDDYDIMN 182


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  325 bits (833), Expect = 7e-87
 Identities = 155/168 (92%), Positives = 163/168 (97%)
 Frame = +3

Query: 54  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 233
           VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYS +C+MVQKLVN +KQMDPKDPFR+DMT
Sbjct: 15  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSSICRMVQKLVNTVKQMDPKDPFRVDMT 74

Query: 234 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 413
           DKLLEKLYNMGVI TRQSITLCERLTVS+FCRRRLSTVLV+LKFAEHLKEAVTYIEQGHV
Sbjct: 75  DKLLEKLYNMGVISTRQSITLCERLTVSAFCRRRLSTVLVKLKFAEHLKEAVTYIEQGHV 134

Query: 414 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 557
           RVGP T+TDPA+LVTRNMED ITWVDSSKIKRKVLQYNDKLDDYDLMN
Sbjct: 135 RVGPNTITDPAYLVTRNMEDLITWVDSSKIKRKVLQYNDKLDDYDLMN 182


>ref|XP_003548526.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Glycine max]
          Length = 187

 Score =  316 bits (810), Expect = 3e-84
 Identities = 153/168 (91%), Positives = 160/168 (95%)
 Frame = +3

Query: 54  VNFLEWKREGGHRENMVMQRYHVTGRDDYKKYSGLCQMVQKLVNMLKQMDPKDPFRIDMT 233
           V FLEWKREGGHREN++MQRYH+TG DDYKKYSGLC MVQKLVN+LKQMD KDPFRIDMT
Sbjct: 20  VIFLEWKREGGHRENLIMQRYHITGLDDYKKYSGLCHMVQKLVNILKQMDQKDPFRIDMT 79

Query: 234 DKLLEKLYNMGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHV 413
           DKLLEKLYNMGVIPTRQSI LC+RLTVSSFCR RLSTVLVRLKFAEHLKEAVTYIEQGH+
Sbjct: 80  DKLLEKLYNMGVIPTRQSIMLCKRLTVSSFCRHRLSTVLVRLKFAEHLKEAVTYIEQGHI 139

Query: 414 RVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDLMN 557
           RVGPETVTDPAFLVTRNMEDF+T VDS KIKRKVLQYNDKLDDYDLMN
Sbjct: 140 RVGPETVTDPAFLVTRNMEDFVTLVDSFKIKRKVLQYNDKLDDYDLMN 187


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