BLASTX nr result

ID: Glycyrrhiza23_contig00000450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000450
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529348.1| PREDICTED: protein E6-like [Glycine max]          114   6e-24
ref|XP_003542722.1| PREDICTED: protein E6-like [Glycine max]          109   2e-22
gb|ACU22983.1| unknown [Glycine max]                                  107   1e-21
gb|AFK47088.1| unknown [Medicago truncatula]                           94   1e-17
ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycin...    84   9e-15

>ref|XP_003529348.1| PREDICTED: protein E6-like [Glycine max]
          Length = 376

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/118 (55%), Positives = 73/118 (61%)
 Frame = -2

Query: 354 MAPISKXXXXXXXXXXXXXLQTNARDSQFFSKVTPINKSNVRETEVPKNEGPVNKPEQQE 175
           MAPISK             LQ NARDSQFFSKVTP+N +N++ETEVPKNEG VNKPEQQ 
Sbjct: 1   MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLN-NNIKETEVPKNEGQVNKPEQQ- 58

Query: 174 QPVFIPETENSYGLYGHESGLHXXXXXXXXXXXXXXXXXXXXXXXTSEEDNTNKYPNN 1
            PVF PETENSYGLYGHE+GLH                       T+ E++T KY NN
Sbjct: 59  -PVFTPETENSYGLYGHETGLHPPTTTITNAAPYTTATTYKPYKTTTAEEDTAKYSNN 115


>ref|XP_003542722.1| PREDICTED: protein E6-like [Glycine max]
          Length = 372

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/82 (69%), Positives = 62/82 (75%)
 Frame = -2

Query: 354 MAPISKXXXXXXXXXXXXXLQTNARDSQFFSKVTPINKSNVRETEVPKNEGPVNKPEQQE 175
           MAPISK             LQ NARDSQFFSKVTP+N +N++ETE PKNEG VNKPEQQ 
Sbjct: 1   MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLN-NNIKETETPKNEGQVNKPEQQ- 58

Query: 174 QPVFIPETENSYGLYGHESGLH 109
            P FIPETENSYGLYGHE+GLH
Sbjct: 59  -PTFIPETENSYGLYGHETGLH 79


>gb|ACU22983.1| unknown [Glycine max]
          Length = 372

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = -2

Query: 354 MAPISKXXXXXXXXXXXXXLQTNARDSQFFSKVTPINKSNVRETEVPKNEGPVNKPEQQE 175
           MAPISK             LQ NARDSQFFSKVTP+N +N++ETE PKNEG VNKPEQQ 
Sbjct: 1   MAPISKLIPFLFLTTLLVSLQVNARDSQFFSKVTPLN-NNIKETETPKNEGQVNKPEQQ- 58

Query: 174 QPVFIPETENSYGLYGHESGLH 109
            P FIPETE SYGLYGHE+GLH
Sbjct: 59  -PTFIPETETSYGLYGHETGLH 79


>gb|AFK47088.1| unknown [Medicago truncatula]
          Length = 358

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/82 (60%), Positives = 57/82 (69%)
 Frame = -2

Query: 354 MAPISKXXXXXXXXXXXXXLQTNARDSQFFSKVTPINKSNVRETEVPKNEGPVNKPEQQE 175
           MAPISK             LQ +ARDSQFFSKVT +N +N    EVP NE P+NKPE Q 
Sbjct: 1   MAPISKFLSFLFLTALSFSLQIHARDSQFFSKVTHVNNNN-NVREVPNNETPLNKPENQ- 58

Query: 174 QPVFIPETENSYGLYGHESGLH 109
            PVF+PETENSYGLYGH++GLH
Sbjct: 59  -PVFVPETENSYGLYGHDTGLH 79


>ref|XP_003543027.1| PREDICTED: protein E6-like isoform 1 [Glycine max]
           gi|356549293|ref|XP_003543028.1| PREDICTED: protein
           E6-like isoform 2 [Glycine max]
          Length = 272

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/78 (60%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -2

Query: 354 MAPISKXXXXXXXXXXXXXLQTNARDSQFFSKVTPINKSNVRETEVPKNEGP-VNKPEQQ 178
           MAP S              LQ +ARDSQFFSKVT  +K++V+ETE+P  E P VNKPEQ 
Sbjct: 1   MAPSSNYISFLFLTTLLFALQISARDSQFFSKVTHFDKNSVKETELPNKEAPEVNKPEQ- 59

Query: 177 EQPVFIPETENSYGLYGH 124
            QP FIPETENSYGLYGH
Sbjct: 60  -QPPFIPETENSYGLYGH 76


Top