BLASTX nr result

ID: Glycyrrhiza23_contig00000439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000439
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatu...   253   6e-65
gb|AFK44070.1| unknown [Lotus japonicus]                              245   1e-62
gb|AFK45217.1| unknown [Lotus japonicus]                              244   3e-62
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   237   3e-60
ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycin...   236   4e-60

>ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatula]
           gi|355490158|gb|AES71361.1| 30S ribosomal protein S13
           [Medicago truncatula] gi|388516343|gb|AFK46233.1|
           unknown [Medicago truncatula]
          Length = 166

 Score =  253 bits (645), Expect = 6e-65
 Identities = 126/154 (81%), Positives = 142/154 (92%), Gaps = 1/154 (0%)
 Frame = +2

Query: 53  MAQTLAIPVAPSLAVICN-NGHFSNNRVSFPVLKSPNPKVNRLSIQCVRVGGVEIPNNKR 229
           M QTL++PVAPSL++I   + HFSN RVSFPVL +P  KV RL+I CVRVGGVEIPNNKR
Sbjct: 1   MVQTLSMPVAPSLSIISKGHAHFSN-RVSFPVLNTPKSKVQRLNIVCVRVGGVEIPNNKR 59

Query: 230 IEFSLQYIHGVGRNIARKILSDINMENKVTKDLNEEELITLRDEVSKYMIEGDLRRFNAL 409
           IEFSLQYIHGVGRN AR+IL+DI+MENKVTK+L+EEELI+LRDEV+KYMIEGDLRRFNAL
Sbjct: 60  IEFSLQYIHGVGRNRARQILTDISMENKVTKELSEEELISLRDEVNKYMIEGDLRRFNAL 119

Query: 410 NIKRLKDIQCYRGVRHIQGLPCRGQRTKNNCRTL 511
           NIKRLK+IQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 120 NIKRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>gb|AFK44070.1| unknown [Lotus japonicus]
          Length = 164

 Score =  245 bits (626), Expect = 1e-62
 Identities = 124/153 (81%), Positives = 135/153 (88%)
 Frame = +2

Query: 53  MAQTLAIPVAPSLAVICNNGHFSNNRVSFPVLKSPNPKVNRLSIQCVRVGGVEIPNNKRI 232
           MAQTLA+PVAPSLA I N  H  ++RVS PV  +P  KV  LSI+ VRVGGVEIPNNKRI
Sbjct: 1   MAQTLAMPVAPSLAAISNGHHHFSSRVSLPVANTP--KVQGLSIKSVRVGGVEIPNNKRI 58

Query: 233 EFSLQYIHGVGRNIARKILSDINMENKVTKDLNEEELITLRDEVSKYMIEGDLRRFNALN 412
           EFSLQYIHGVGR  ARKIL D+NM+NK+TK+L+EEELITLRDEVSKYMIEGDLRRFNA N
Sbjct: 59  EFSLQYIHGVGRVRARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATN 118

Query: 413 IKRLKDIQCYRGVRHIQGLPCRGQRTKNNCRTL 511
           IKRLKDIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 119 IKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTL 151


>gb|AFK45217.1| unknown [Lotus japonicus]
          Length = 164

 Score =  244 bits (622), Expect = 3e-62
 Identities = 123/153 (80%), Positives = 135/153 (88%)
 Frame = +2

Query: 53  MAQTLAIPVAPSLAVICNNGHFSNNRVSFPVLKSPNPKVNRLSIQCVRVGGVEIPNNKRI 232
           MAQTLA+PVAPSLA I N  H  ++RVS PV  +P  KV  LSI+ VRVGGVEIPNNKRI
Sbjct: 1   MAQTLAMPVAPSLAAISNGHHHFSSRVSLPVANTP--KVQGLSIKSVRVGGVEIPNNKRI 58

Query: 233 EFSLQYIHGVGRNIARKILSDINMENKVTKDLNEEELITLRDEVSKYMIEGDLRRFNALN 412
           EFSLQYIHGVGR  ARKIL D+NM+NK+TK+L+EEELITLRDEVSKYMIEGDL+RFNA N
Sbjct: 59  EFSLQYIHGVGRVRARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLQRFNATN 118

Query: 413 IKRLKDIQCYRGVRHIQGLPCRGQRTKNNCRTL 511
           IKRLKDIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 119 IKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTL 151


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  237 bits (604), Expect = 3e-60
 Identities = 118/154 (76%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
 Frame = +2

Query: 53  MAQTLAIPVAPSLAVICNNGHFSNNRVSFPVLKSPNP-KVNRLSIQCVRVGGVEIPNNKR 229
           MAQTLA+PVAPSL++ICN G  +N+  +F  L   NP K++ LSIQC RVGGVEIPNNKR
Sbjct: 1   MAQTLAMPVAPSLSLICN-GWRNNSLSTFVSLPISNPPKIHGLSIQCARVGGVEIPNNKR 59

Query: 230 IEFSLQYIHGVGRNIARKILSDINMENKVTKDLNEEELITLRDEVSKYMIEGDLRRFNAL 409
           +E+SLQYIHGVGR+ AR+ILSD++M+NK+TKDL+EEELITLRDEVSKYMIEGDLRRFNAL
Sbjct: 60  VEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNAL 119

Query: 410 NIKRLKDIQCYRGVRHIQGLPCRGQRTKNNCRTL 511
           NI+ LK+IQC+RG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 120 NIRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycine max]
           gi|255630109|gb|ACU15408.1| unknown [Glycine max]
          Length = 162

 Score =  236 bits (603), Expect = 4e-60
 Identities = 120/153 (78%), Positives = 134/153 (87%)
 Frame = +2

Query: 53  MAQTLAIPVAPSLAVICNNGHFSNNRVSFPVLKSPNPKVNRLSIQCVRVGGVEIPNNKRI 232
           MAQTLA+PVAPSLA+I N+    +N +S PVL  P  KV   SI+CVRVGGVEIPNNKRI
Sbjct: 1   MAQTLAMPVAPSLAIISNSR--LSNTLSVPVLNKP--KVQGSSIKCVRVGGVEIPNNKRI 56

Query: 233 EFSLQYIHGVGRNIARKILSDINMENKVTKDLNEEELITLRDEVSKYMIEGDLRRFNALN 412
           E+SLQYIHGVGR  A++IL DI M+NK+TK+L EEELITLRDEVSKYMIEGDLRRFNA+N
Sbjct: 57  EYSLQYIHGVGRTRAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVN 116

Query: 413 IKRLKDIQCYRGVRHIQGLPCRGQRTKNNCRTL 511
           IKRLKDIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 117 IKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTL 149


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