BLASTX nr result

ID: Glycyrrhiza23_contig00000415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000415
         (2058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin...   599   e-169
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin...   596   e-168
ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...   595   e-167
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   587   e-165
ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [...   524   e-146

>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 490

 Score =  599 bits (1545), Expect = e-169
 Identities = 296/480 (61%), Positives = 339/480 (70%), Gaps = 7/480 (1%)
 Frame = +1

Query: 280  KDPQLGSQGEPHSPDPQAPDPNHVTQVDDALGGELQNKLDLKDGDETENKGSNFEVGGEE 459
            ++PQLG    P +P P+  D NH  + ++ L GELQ+KLDLKD DE+E K S+F  GG  
Sbjct: 17   EEPQLGRPSSPAAP-PEPSDLNHAAE-EETLSGELQSKLDLKDVDESEEKVSDFNDGGGV 74

Query: 460  LCGEVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENVNESGSDKVGGDVD-- 633
               E    +                                    +  G D V GDVD  
Sbjct: 75   CDEETGKGDGDSKGWETNSWNEEVGVDVDVDGDG-----------DGDGDDDVDGDVDGD 123

Query: 634  -EVENKDERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNHPVRWKNQAVKEKVGE 810
             EVE K+ R+S     YPLRPEAEDCAFY+KTG CKFGFNC+FNHP++ K+QAVKEK GE
Sbjct: 124  DEVEKKEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGE 183

Query: 811  RDELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAP--VLELNFLGLPIRVGGKE 984
            R+E  ERS  TECKYY RSGGCKFGK+CK+NHTRGK S AP  +LELNFLGLPIR G +E
Sbjct: 184  REETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPGERE 243

Query: 985  CPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXXXXXXX--IPSWSSTR 1158
            CPYYMRTGSCKFGANCKFNHPDPT V                          +PSWSS R
Sbjct: 244  CPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQGVSQTSVPSWSSPR 303

Query: 1159 TLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPSTYVVNNPVIETNVYMH 1338
            TLNE +PFVP+++SPT GVS QSS+WNGYQA VYL ERS+ PPST+V+NNP I+TNVYMH
Sbjct: 304  TLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERSIHPPSTFVMNNPAIDTNVYMH 363

Query: 1339 HQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITRLPPCNLSDKGLPLRP 1518
            HQ QMPV+EFPERPG+PECS+FLKTGDCKFKSNCKFHHPKNR+TRLPPCNLSDKGLPLRP
Sbjct: 364  HQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRP 423

Query: 1519 DQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNSASVDVVGSGGANGAT 1698
            DQ+VC HYSRYGICKFGPACKFDHPIN  P  +PGL+QQ SY+NSAS  V G GG+ G T
Sbjct: 424  DQSVCSHYSRYGICKFGPACKFDHPINLQPVMIPGLEQQ-SYSNSASAGVAGIGGSTGVT 482


>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 501

 Score =  596 bits (1536), Expect = e-168
 Identities = 298/485 (61%), Positives = 347/485 (71%), Gaps = 10/485 (2%)
 Frame = +1

Query: 280  KDPQLGSQGEPHSPDPQAPDPNHVTQVDDALGGELQNKLDLKDGDETENKGSNFEVGGEE 459
            ++PQLG+   P +P P+  D NH  + ++AL  ELQ+KLDLKDGDE+E + S+   G   
Sbjct: 17   EEPQLGASSSPAAP-PEPSDLNHAAE-EEALSRELQSKLDLKDGDESEERVSDLNDGRGV 74

Query: 460  LCGEVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTE-NVNESGSDKVGGDVD- 633
               E   P+                                 + +V++ G   V  DVD 
Sbjct: 75   CDEETGKPDGDSRGWETNSWNEEVGVDAEVHVFGDGDVHDAGDGDVHDVGDGDVDVDVDD 134

Query: 634  EVENKDERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNHPVRWKNQAVKEKVGER 813
            EVE K+  +S  AQ YPLRPEAEDCAFY+KTG CKFGFNC+FNHP+R K+QAVKEK GER
Sbjct: 135  EVEKKEGGNSGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGER 194

Query: 814  DELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAP--VLELNFLGLPIRVGGKEC 987
            +E  ERS  TECKYY RSGGCKFGK+CK+NHTRGK S AP  +LELNFLGLPIR+G +EC
Sbjct: 195  EETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRLGEREC 254

Query: 988  PYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXXXXXXX--IPSWSSTRT 1161
            PYYMRTGSCKFGANCKFNHPDPT V                          +PSWSS RT
Sbjct: 255  PYYMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSISLQGVSQTSVPSWSSPRT 314

Query: 1162 LNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPSTYVVNNPVIETNVYMHH 1341
            LNE++PFVP+++SPT GVS QSS+WNGYQA VYL ER+M PPST+V+NNP I+TNVYMHH
Sbjct: 315  LNESSPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVMNNPAIDTNVYMHH 374

Query: 1342 QNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITRLPPCNLSDKGLPLRPD 1521
            Q QMPV+EFPERPG+PECSYFLKTGDCKFKSNCKF+HPKNR+ RLPPCNLSDKGLPLRPD
Sbjct: 375  QKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPLRPD 434

Query: 1522 QNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNSASVDVVGSGGANG--- 1692
            Q+VC HYSRYGICKFGPACKFDHPIN  P  +PGL QQ SY+NSASV+V G  G+ G   
Sbjct: 435  QSVCSHYSRYGICKFGPACKFDHPINLQPVMIPGLGQQ-SYSNSASVEVAGIFGSTGVVT 493

Query: 1693 -ATIQ 1704
             ATIQ
Sbjct: 494  DATIQ 498


>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355504462|gb|AES85665.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 511

 Score =  595 bits (1534), Expect = e-167
 Identities = 300/492 (60%), Positives = 334/492 (67%), Gaps = 29/492 (5%)
 Frame = +1

Query: 313  HSPDPQAPDPNHVTQVDDALGGELQNKLDLKDGDETENKGSNFEVGGEELCGEVAAPEAX 492
            H P+P   D N + Q+DD    ELQNKLDLKD D  E KGSNFEVG E    E    +  
Sbjct: 26   HPPEPS--DLNQLAQLDD----ELQNKLDLKDEDVIEEKGSNFEVGHEVAVLESDKGQGC 79

Query: 493  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENVNESGSDKVGG----DVDE-------- 636
                                           +  + + S+K  G    DVD+        
Sbjct: 80   HDDDENVNEKVSTDVDEVGGIDDKGSNFEVDDETSATVSEKGQGFHQVDVDDDDGWNGDY 139

Query: 637  ------------VENK-----DERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNH 765
                        +EN+     DERS+  A+QYPLRPEAEDC+FYLKTGTCKFGFNC+FNH
Sbjct: 140  DGWNDDNEVSDWIENEVSGDVDERSNGGAEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNH 199

Query: 766  PVRWKNQAVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAPVLEL 945
            P+  +NQ  +E+ GERDELEERS QTECKYYSRSGGCKFGK CKF+HTRGK SA  VLEL
Sbjct: 200  PLGRRNQVFRERAGERDELEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLEL 259

Query: 946  NFLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXXXX 1125
            NFLGLPIR+G KECPYYMRTGSCKFGANCKFNHPDPT+V                     
Sbjct: 260  NFLGLPIRLGEKECPYYMRTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVS 319

Query: 1126 XXXIPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPSTYVVN 1305
                P WSSTR  NETAPFVPIIISPT G SP+SS+WNGYQAP YLSERSM PPS Y VN
Sbjct: 320  QSSTPPWSSTRKFNETAPFVPIIISPTPGASPRSSDWNGYQAPFYLSERSMHPPSPYAVN 379

Query: 1306 NPVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITRLPPC 1485
            NP +E N YMH     PVEEFPERPG+PECS+FLKTGDCKFKS+CKFHHPKNRIT+LPPC
Sbjct: 380  NPAMEMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPC 439

Query: 1486 NLSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNSASVD 1665
            NLSDKGLPLRP QNVC HYSRYGICKFGPACK+DHPIN PP  MPG  QQSS+TNSAS++
Sbjct: 440  NLSDKGLPLRPGQNVCTHYSRYGICKFGPACKYDHPINLPPPTMPGRYQQSSHTNSASIE 499

Query: 1666 VVGSGGANGATI 1701
              GS GA+ ATI
Sbjct: 500  EAGSAGASDATI 511


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 570

 Score =  587 bits (1513), Expect = e-165
 Identities = 282/372 (75%), Positives = 299/372 (80%)
 Frame = +1

Query: 589  NVNESGSDKVGGDVDEVENKDERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNHP 768
            NVNES SDKVGGDV+ V  K ERSS RAQQYPLRPEAEDCAFYLKTGTCKFGFNC+FNHP
Sbjct: 202  NVNESESDKVGGDVEGV--KGERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHP 259

Query: 769  VRWKNQAVKEKVGERDELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAPVLELN 948
            +R KNQA KE  GER+E  ERS Q ECKYY RSGGCKFGKACKFNHTRGK S+A   ELN
Sbjct: 260  LRRKNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELN 319

Query: 949  FLGLPIRVGGKECPYYMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXXXXX 1128
            FLGLPIRVG KEC YYMRTGSCKFGANC+FNHPDPTTV                      
Sbjct: 320  FLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISLQGVSQ 379

Query: 1129 XXIPSWSSTRTLNETAPFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPSTYVVNN 1308
              I SWSSTR LNE+APFVP+I+SP  GVSPQSSEWNGYQAPVYLSERS+ PPSTYV+NN
Sbjct: 380  SSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAPVYLSERSLHPPSTYVMNN 439

Query: 1309 PVIETNVYMHHQNQMPVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITRLPPCN 1488
            P +E+NVYMHHQ QM VEEFPERPG+PECSYFLKTGDCKFKSNCKFHHPKNRI RLP CN
Sbjct: 440  PAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCN 499

Query: 1489 LSDKGLPLRPDQNVCMHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNSASVDV 1668
            LSDKGLPLRPDQNVC +Y RYGICKFGPACKFDH   P PS M G DQQS+Y NSA VDV
Sbjct: 500  LSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDH---PAPSTMAGHDQQSTYINSAGVDV 556

Query: 1669 VGSGGANGATIQ 1704
              +GGA     Q
Sbjct: 557  AENGGAEDGNQQ 568



 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 41/64 (64%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
 Frame = +1

Query: 280 KDPQLG---SQGEPHSPDPQAPDPNHVTQVDDALGGELQNKLDLKDGDETENKGSNFEVG 450
           KDP LG   S   P   DPQ  D NHVT VDDALG ELQ KLDLKD  E++NKGSN E G
Sbjct: 14  KDPLLGEPSSSVHPLDHDPQPSDLNHVTPVDDALGEELQGKLDLKDEGESDNKGSNLEDG 73

Query: 451 GEEL 462
           GE+L
Sbjct: 74  GEKL 77


>ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355509959|gb|AES91101.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 573

 Score =  524 bits (1350), Expect = e-146
 Identities = 245/358 (68%), Positives = 285/358 (79%), Gaps = 3/358 (0%)
 Frame = +1

Query: 640  ENKDERSSDRAQQYPLRPEAEDCAFYLKTGTCKFGFNCRFNHPVRWKNQ--AVKEKVGER 813
            + K+E+SSD   Q+PLRPEAEDC+FY+KTG+CKFGFNC+FNHP+R KNQ  AV+EKV ER
Sbjct: 218  DEKEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVRER 277

Query: 814  DELEERSDQTECKYYSRSGGCKFGKACKFNHTRGKCSAAPVLELNFLGLPIRVGGKECPY 993
            +E EE + QTECKYY RSGGCKFGKACK+NH+RG    AP+ ELNFLGLPIR+G +ECPY
Sbjct: 278  EEPEENAGQTECKYYQRSGGCKFGKACKYNHSRG--FTAPISELNFLGLPIRLGERECPY 335

Query: 994  YMRTGSCKFGANCKFNHPDPTTVXXXXXXXXXXXXXXXXXXXXXXXXIPSWSSTRTLNET 1173
            YMRTGSCKFG+NC+FNHPDPTTV                        + SWSS R LNET
Sbjct: 336  YMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSS-RKLNET 394

Query: 1174 APFVPIIISPTSGVSPQSSEWNGYQAPVYLSERSMQPPSTYVVNNPVIETNVYMHHQNQM 1353
             PF P++ +PT G++PQ+S+WNGYQAP YLSER M P STYV+NNP I+TNVYMHHQ QM
Sbjct: 395  -PFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIDTNVYMHHQKQM 453

Query: 1354 PVEEFPERPGQPECSYFLKTGDCKFKSNCKFHHPKNRITRLPPCNLSDKGLPLRPDQNVC 1533
            P E FPERPG+PECS+F+KTGDCKFKSNCKFHHPKNR+ +LPPCNLSDKGLPLRPDQ+VC
Sbjct: 454  PFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVC 513

Query: 1534 MHYSRYGICKFGPACKFDHPINPPPSAMPGLDQQSSYTNSASVDVVGSGG-ANGATIQ 1704
             HYSRYGICKFGPAC+FDHP +  P  MPGL QQ S+ NSA+  V G GG A+ ATIQ
Sbjct: 514  SHYSRYGICKFGPACRFDHPESALPLMMPGLGQQ-SFANSANAQVAGMGGSASDATIQ 570


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