BLASTX nr result

ID: Glycyrrhiza23_contig00000407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000407
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604074.1| 50S ribosomal protein L3 [Medicago truncatul...   364   2e-98
ref|XP_003526857.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   361   1e-97
gb|ACU19859.1| unknown [Glycine max]                                  361   1e-97
ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   355   7e-96
gb|ACJ85061.1| unknown [Medicago truncatula]                          355   7e-96

>ref|XP_003604074.1| 50S ribosomal protein L3 [Medicago truncatula]
           gi|355493122|gb|AES74325.1| 50S ribosomal protein L3
           [Medicago truncatula]
          Length = 272

 Score =  364 bits (934), Expect = 2e-98
 Identities = 186/232 (80%), Positives = 201/232 (86%), Gaps = 2/232 (0%)
 Frame = -1

Query: 691 SFSLGAVPFQTK--KPFSQLQFPRSRGRGAMVVAMSVEAGVGVMGTKLGMMSFFQQDGXX 518
           S S  ++ F T     F +LQ  + +  GAMVV MS+EAGVGVMGTKLGMMSFFQ +G  
Sbjct: 17  SSSSSSLSFSTSFSAQFVKLQQHQRKRGGAMVVKMSLEAGVGVMGTKLGMMSFFQPNGEV 76

Query: 517 XXXXXVGFKEGNIVTQIKTHSTDGYSAVQVGYQRVRDRKLTKPEMGHLQKAGAIPMRHLQ 338
                VGFKEGNIVTQIKT +TDGY+AVQVGY+RVRDRKLTKPEMGHL+KAGAIPMRHLQ
Sbjct: 77  VPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKAGAIPMRHLQ 136

Query: 337 EFRLQSVDGFDPNQPLLFDELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSH 158
           EFRLQSVDGF+PNQ L+FDELF EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSH
Sbjct: 137 EFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSH 196

Query: 157 RQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKVDKDLNVLMIKGA 2
           RQLGSIGAGTTPGRVYKGKKMPGRMGGT  K RKLKIVK+DKDLNV+MIKGA
Sbjct: 197 RQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGA 248


>ref|XP_003526857.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 264

 Score =  361 bits (927), Expect = 1e-97
 Identities = 187/233 (80%), Positives = 200/233 (85%)
 Frame = -1

Query: 700 RCFSFSLGAVPFQTKKPFSQLQFPRSRGRGAMVVAMSVEAGVGVMGTKLGMMSFFQQDGX 521
           RC S S+  +P     PF QLQ  R R +G  VV MS+EAG+GVMGTKLGMMS+F+ DG 
Sbjct: 12  RC-SISISRLPLPLPLPF-QLQV-RRRAKGGKVV-MSMEAGIGVMGTKLGMMSYFESDGE 67

Query: 520 XXXXXXVGFKEGNIVTQIKTHSTDGYSAVQVGYQRVRDRKLTKPEMGHLQKAGAIPMRHL 341
                 VGFKEGNIVTQIKT +TDGY AVQVGY+RVRDRKLTKPEMGHL K GAIPMRHL
Sbjct: 68  VVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEMGHLHKVGAIPMRHL 127

Query: 340 QEFRLQSVDGFDPNQPLLFDELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKS 161
           QEFRLQ++DGFD NQ LLFDE FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKS
Sbjct: 128 QEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKS 187

Query: 160 HRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKVDKDLNVLMIKGA 2
           HRQLGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVK+DKDLNVLMIKGA
Sbjct: 188 HRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVLMIKGA 240


>gb|ACU19859.1| unknown [Glycine max]
          Length = 264

 Score =  361 bits (927), Expect = 1e-97
 Identities = 187/233 (80%), Positives = 200/233 (85%)
 Frame = -1

Query: 700 RCFSFSLGAVPFQTKKPFSQLQFPRSRGRGAMVVAMSVEAGVGVMGTKLGMMSFFQQDGX 521
           RC S S+  +P     PF QLQ  R R +G  VV MS+EAG+GVMGTKLGMMS+F+ DG 
Sbjct: 12  RC-SISISRLPLPLPLPF-QLQV-RRRAKGGKVV-MSMEAGIGVMGTKLGMMSYFESDGE 67

Query: 520 XXXXXXVGFKEGNIVTQIKTHSTDGYSAVQVGYQRVRDRKLTKPEMGHLQKAGAIPMRHL 341
                 VGFKEGNIVTQIKT +TDGY AVQVGY+RVRDRKLTKPEMGHL K GAIPMRHL
Sbjct: 68  VVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEMGHLHKVGAIPMRHL 127

Query: 340 QEFRLQSVDGFDPNQPLLFDELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKS 161
           QEFRLQ++DGFD NQ LLFDE FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKS
Sbjct: 128 QEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKS 187

Query: 160 HRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKVDKDLNVLMIKGA 2
           HRQLGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVK+DKDLNVLMIKGA
Sbjct: 188 HRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVLMIKGA 240


>ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 263

 Score =  355 bits (911), Expect = 7e-96
 Identities = 175/209 (83%), Positives = 191/209 (91%)
 Frame = -1

Query: 628 RSRGRGAMVVAMSVEAGVGVMGTKLGMMSFFQQDGXXXXXXXVGFKEGNIVTQIKTHSTD 449
           R RG+G +V  MS+EAG+GVMGTKLGMMS+F+ DG       VGFKEGNIVTQIKT +TD
Sbjct: 33  RRRGKGKVV--MSMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATD 90

Query: 448 GYSAVQVGYQRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLQSVDGFDPNQPLLFDELFK 269
           GY AVQVGY+RVRDRKLTKPE+GHLQK GAIPMRHLQEFRLQ++DGFD NQ L+FDE+FK
Sbjct: 91  GYDAVQVGYRRVRDRKLTKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRLVFDEIFK 150

Query: 268 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPG 89
           EGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRQLGSIGAGTTPGRVYKGKKMPG
Sbjct: 151 EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPG 210

Query: 88  RMGGTKTKIRKLKIVKVDKDLNVLMIKGA 2
           RMGGTK KIRKLKIVK+DKDLNV+MIKGA
Sbjct: 211 RMGGTKRKIRKLKIVKIDKDLNVVMIKGA 239


>gb|ACJ85061.1| unknown [Medicago truncatula]
          Length = 243

 Score =  355 bits (911), Expect = 7e-96
 Identities = 184/231 (79%), Positives = 198/231 (85%), Gaps = 3/231 (1%)
 Frame = -1

Query: 697 CFSFSLGAVPFQTK--KPFSQL-QFPRSRGRGAMVVAMSVEAGVGVMGTKLGMMSFFQQD 527
           C + S  ++ F T     F +L Q  R RG GAMVV MS+EAGVGVMGTKLGMMSFFQ +
Sbjct: 14  CSNSSSSSLSFSTSFSAQFVKLRQHQRKRG-GAMVVKMSLEAGVGVMGTKLGMMSFFQPN 72

Query: 526 GXXXXXXXVGFKEGNIVTQIKTHSTDGYSAVQVGYQRVRDRKLTKPEMGHLQKAGAIPMR 347
           G       VGFKEGNIVTQIKT +TDGY+AVQVGY+RVRDRKLTKPEMGHL+KAGAIPM 
Sbjct: 73  GEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKAGAIPMH 132

Query: 346 HLQEFRLQSVDGFDPNQPLLFDELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGS 167
           HLQEFRLQSVDGF+PNQ L+FDELF EGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGS
Sbjct: 133 HLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGS 192

Query: 166 KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKVDKDLNVLM 14
           KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGT  K RKLKIVK+DKDLNV+M
Sbjct: 193 KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIM 243


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