BLASTX nr result
ID: Glycyrrhiza23_contig00000395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00000395
(1948 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine m... 931 0.0
ref|XP_003546061.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro... 916 0.0
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ... 872 0.0
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t... 870 0.0
gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ... 870 0.0
>ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine max]
gi|222142535|gb|ACM45954.1| serine
hydroxymethyltransferase 4 [Glycine max]
Length = 536
Score = 931 bits (2405), Expect = 0.0
Identities = 469/530 (88%), Positives = 490/530 (92%), Gaps = 11/530 (2%)
Frame = -1
Query: 1687 MGSLQQ-PVWTKWQNFTYKGY-TGHGFMPQVNFYNVKPCKASHVEGSLVTGKPSSVSFSV 1514
M SLQQ P+WTK NF KGY + +GF+PQV F N+KP KASHVE SLVTGKPSSV FSV
Sbjct: 7 MSSLQQQPIWTKGLNFPAKGYGSNNGFLPQVRFCNIKPSKASHVEASLVTGKPSSVPFSV 66
Query: 1513 PEIGGDGSSFLDYGLSEADPDVHAIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLTN 1334
PEIGGDGSSFLDYGLSEADPDV AIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLTN
Sbjct: 67 PEIGGDGSSFLDYGLSEADPDVRAIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLTN 126
Query: 1333 KYSEGLPGKRYYGGNEYIDELETLCQERALAAFHVDGKKWGVNVQPLSGSPANFAVYTAI 1154
KYSEGLPGKRYYGGNEYIDELE LCQ+RALAAFHVD KWGVNVQ LSGSPANFAVYTA+
Sbjct: 127 KYSEGLPGKRYYGGNEYIDELEILCQQRALAAFHVDENKWGVNVQTLSGSPANFAVYTAV 186
Query: 1153 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGLIDYDMLERTAN 974
LKPHDRIMGLDLPHGGHLSHGFMTPK+RVSATSIYFESMPYRLDESTGLIDYDMLE+TA
Sbjct: 187 LKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLIDYDMLEKTAT 246
Query: 973 LFRPKLIIAGASAYPRDIDYPRMRK---------IADQVGAFLMMDMAHISGLVAASVLA 821
LFRPKLI+AGASAYPRDIDYPRMRK IAD+VGAFLMMDMAHISGLVAASVL+
Sbjct: 247 LFRPKLIVAGASAYPRDIDYPRMRKLITSYMHGKIADEVGAFLMMDMAHISGLVAASVLS 306
Query: 820 NPFEFCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGG 641
NPFE+CDIVTTTTHKSLRGPRGGMIFFKKD+VHGVDLE AINNAVFPGLQGGPHNHTIGG
Sbjct: 307 NPFEYCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQGGPHNHTIGG 366
Query: 640 LAVCLKHAQSPEFKIYQNQVVANSRALANRLTEHGYKLVSGGSDNHLVLVDLRPSGIDGA 461
LAVCLK+AQSPEFK YQNQVVAN RALA RL EHGYKLVSGGSDNHLVLVDLRPSG+DGA
Sbjct: 367 LAVCLKYAQSPEFKNYQNQVVANCRALAKRLIEHGYKLVSGGSDNHLVLVDLRPSGLDGA 426
Query: 460 RAEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADFIHEGVQI 281
R EKILD+ASITLNKNSVPGDKSALVPGGIRIG+PAMTTRGLGEKEF+LIADFIHEGVQI
Sbjct: 427 RVEKILDLASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLGEKEFSLIADFIHEGVQI 486
Query: 280 SLEAKSLAPGTKLQDFMNFVLSPEFPLVDKVSELRRKVEALTTQYPIPGV 131
SLEAKSL GTKLQDF+ FV S EFPL +KVSELRRKVEALTTQYPIPGV
Sbjct: 487 SLEAKSLVSGTKLQDFLKFVTSSEFPLGEKVSELRRKVEALTTQYPIPGV 536
>ref|XP_003546061.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
mitochondrial-like [Glycine max]
Length = 536
Score = 916 bits (2368), Expect = 0.0
Identities = 461/531 (86%), Positives = 487/531 (91%), Gaps = 11/531 (2%)
Frame = -1
Query: 1690 MMGSLQQ-PVWTKWQNFTYKGY-TGHGFMPQVNFYNVKPCKASHVEGSLVTGKPSSVSFS 1517
MM SLQQ P+WTK NF KGY + +GF+ Q+ F N+KP KASHVE SLV GKPSSVSFS
Sbjct: 6 MMSSLQQQPIWTKGLNFPAKGYGSNNGFVTQLRFCNIKPSKASHVEASLVAGKPSSVSFS 65
Query: 1516 VPEIGGDGSSFLDYGLSEADPDVHAIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLT 1337
VPEIGGDGSSFLDYGLSEADP+V AIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLT
Sbjct: 66 VPEIGGDGSSFLDYGLSEADPEVRAIIDKEKDRQFKSLELIASENFTSRAVMEAVGSCLT 125
Query: 1336 NKYSEGLPGKRYYGGNEYIDELETLCQERALAAFHVDGKKWGVNVQPLSGSPANFAVYTA 1157
NKYSEGLPG+RYYGGNEYIDELETLCQ+RALAAFHVDG KWGVNVQ LSGSPANFAV+TA
Sbjct: 126 NKYSEGLPGRRYYGGNEYIDELETLCQQRALAAFHVDGNKWGVNVQTLSGSPANFAVFTA 185
Query: 1156 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGLIDYDMLERTA 977
+LKPHDRIMGLDLPHGGHLSHGFMTPK+RVSATSIYFE MPY LDESTGLIDYDMLE+TA
Sbjct: 186 VLKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFEPMPYXLDESTGLIDYDMLEKTA 245
Query: 976 NLFRPKLIIAGASAYPRDIDYPRMRK---------IADQVGAFLMMDMAHISGLVAASVL 824
LFRPKLIIAGASAYP DIDYPRMRK IAD+VGAFLMMDMAHISGLVAASVL
Sbjct: 246 TLFRPKLIIAGASAYPXDIDYPRMRKLITSYTHGKIADEVGAFLMMDMAHISGLVAASVL 305
Query: 823 ANPFEFCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIG 644
ANPFE+CDIVTTTTHKSLRGPRGGMIFFKKD+VHGVDLE AINNAVFPGLQGGPHNHTIG
Sbjct: 306 ANPFEYCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQGGPHNHTIG 365
Query: 643 GLAVCLKHAQSPEFKIYQNQVVANSRALANRLTEHGYKLVSGGSDNHLVLVDLRPSGIDG 464
GLAVCLK+AQSPEFK YQNQVVAN +ALA +L EHGYKLVSGGSDNHLVLVDLRPSG+DG
Sbjct: 366 GLAVCLKYAQSPEFKNYQNQVVANCKALAQQLIEHGYKLVSGGSDNHLVLVDLRPSGLDG 425
Query: 463 ARAEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADFIHEGVQ 284
AR EKILDMASITLNKNSVP DKSALVPGGIRIG+PAMTTRGLGEKEF+LIADF+HEGVQ
Sbjct: 426 ARVEKILDMASITLNKNSVPDDKSALVPGGIRIGTPAMTTRGLGEKEFSLIADFLHEGVQ 485
Query: 283 ISLEAKSLAPGTKLQDFMNFVLSPEFPLVDKVSELRRKVEALTTQYPIPGV 131
I LEAKSL GTKLQDF+ FV S EFPL +K+SELRRKVEALTTQYPIPGV
Sbjct: 486 ICLEAKSLVSGTKLQDFLKFVSSSEFPLGEKISELRRKVEALTTQYPIPGV 536
>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
product [Vitis vinifera]
Length = 528
Score = 872 bits (2253), Expect = 0.0
Identities = 434/529 (82%), Positives = 473/529 (89%), Gaps = 1/529 (0%)
Frame = -1
Query: 1714 MPTCAGVAMMGSLQQPVWTKWQNFTYKGYTGHGFMPQVNFYNVKPCKASHVEGSLVTGKP 1535
M C+G A MGSLQQP+W K +F G T +GF Q+ +VKPC+ S+++GSLVTGKP
Sbjct: 1 MQACSGTAAMGSLQQPIWIKGSSFAPNGSTVNGFPHQIKLNSVKPCR-SYIKGSLVTGKP 59
Query: 1534 -SSVSFSVPEIGGDGSSFLDYGLSEADPDVHAIIDKEKDRQFKSLELIASENFTSRAVME 1358
SSVS +VP G G +F+D+GL+EADP+V AII KEK RQ KSLELIASENFTSRAVME
Sbjct: 60 PSSVSVTVPGNGDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVME 119
Query: 1357 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQERALAAFHVDGKKWGVNVQPLSGSPA 1178
AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAFH+DGKKWGVNVQPLSGSPA
Sbjct: 120 AVGSCLTNKYSEGLPGKRYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPA 179
Query: 1177 NFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGLIDY 998
NF VYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVS TSIYFESMPYRLDESTGL+DY
Sbjct: 180 NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 239
Query: 997 DMLERTANLFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLAN 818
DMLE+TANLFRPKLIIAGASAYPRD DYPRMRKIAD VGAFLMMDMAHISGLVAASV+A+
Sbjct: 240 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVAD 299
Query: 817 PFEFCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGGL 638
PFE+CDIVTTTTHKSLRGPRGGMIFFKKDSV GVDLESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 300 PFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359
Query: 637 AVCLKHAQSPEFKIYQNQVVANSRALANRLTEHGYKLVSGGSDNHLVLVDLRPSGIDGAR 458
+VCLKHAQSPEFK YQNQVV+N RALA RL E GY LVSGGSDNHL+LVDLRP GIDGAR
Sbjct: 360 SVCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGAR 419
Query: 457 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADFIHEGVQIS 278
AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG EKEF ADFIHEGVQ+S
Sbjct: 420 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLS 479
Query: 277 LEAKSLAPGTKLQDFMNFVLSPEFPLVDKVSELRRKVEALTTQYPIPGV 131
LEAK G+KL DFM FV SP+F L+D+VS+L+R+VE LTTQ+P+PG+
Sbjct: 480 LEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528
>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
gi|222855489|gb|EEE93036.1| serine
hydroxymethyltransferase 8 [Populus trichocarpa]
Length = 529
Score = 870 bits (2248), Expect = 0.0
Identities = 436/529 (82%), Positives = 470/529 (88%), Gaps = 1/529 (0%)
Frame = -1
Query: 1714 MPTCAGVAMMGSLQQPVWTKWQNFTYKGYTGHGFMPQVNFYNVKPCKASHVEGSLVTGKP 1535
M +G A+MGSLQQPV +K F K GF QV +VKPC+AS +EGSLVTG+P
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60
Query: 1534 -SSVSFSVPEIGGDGSSFLDYGLSEADPDVHAIIDKEKDRQFKSLELIASENFTSRAVME 1358
SSVS +PE G D SSF DYGL EADP+V II+KEKDRQFKSLELIASENFTSRAVME
Sbjct: 61 PSSVSVPIPETGADISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVME 120
Query: 1357 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQERALAAFHVDGKKWGVNVQPLSGSPA 1178
AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ+RALA+F++DGKKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180
Query: 1177 NFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGLIDY 998
NF VYTA+LKPHDRIMGLDLPHGGHLSHGFMTPKRRVS TSIYFESMPYRLDESTGL+DY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
Query: 997 DMLERTANLFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLAN 818
DMLE+TA LFRPKLIIAGASAYPRD DYPRMRKIAD VGAFLMMDMAHISGLVAASV+A+
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
Query: 817 PFEFCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGGL 638
PFE+CD+VTTTTHKSLRGPRGGMIFFKKD V GVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360
Query: 637 AVCLKHAQSPEFKIYQNQVVANSRALANRLTEHGYKLVSGGSDNHLVLVDLRPSGIDGAR 458
AVCLKHAQSPEFK YQ QV+ NSRALANR+ E GYKLVSGGSDNHL+LVDLRP G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420
Query: 457 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADFIHEGVQIS 278
EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG E EF AD IHEGVQIS
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQIS 480
Query: 277 LEAKSLAPGTKLQDFMNFVLSPEFPLVDKVSELRRKVEALTTQYPIPGV 131
LEAK G+KLQDF+ FV SP+FPL DKVS+L+R+VEALTTQ+PIPG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529
>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
Length = 529
Score = 870 bits (2248), Expect = 0.0
Identities = 436/529 (82%), Positives = 470/529 (88%), Gaps = 1/529 (0%)
Frame = -1
Query: 1714 MPTCAGVAMMGSLQQPVWTKWQNFTYKGYTGHGFMPQVNFYNVKPCKASHVEGSLVTGKP 1535
M +G A+MGSLQQPV +K F K GF QV +VKPC+AS +EGSLVTG+P
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60
Query: 1534 -SSVSFSVPEIGGDGSSFLDYGLSEADPDVHAIIDKEKDRQFKSLELIASENFTSRAVME 1358
SSVS +PE G D SSF DYGLSEADP+V II KEKDRQFKSLELIASENFTSRAVME
Sbjct: 61 PSSVSVPIPETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVME 120
Query: 1357 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQERALAAFHVDGKKWGVNVQPLSGSPA 1178
AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ+RALA+F++DGKKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180
Query: 1177 NFAVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGLIDY 998
NF VYTA+LKPHDRIMGLDLPHGGHLSHGFMTPKRRVS TSIYFESMPYRLDESTGL+DY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
Query: 997 DMLERTANLFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLAN 818
DMLE+TA LFRPKLIIAGASAYPRD DYPRMRKIAD VGAFLMMDMAHISGLV ASV+A+
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVAD 300
Query: 817 PFEFCDIVTTTTHKSLRGPRGGMIFFKKDSVHGVDLESAINNAVFPGLQGGPHNHTIGGL 638
PFE+CD+VTTTTHKSLRGPRGGMIFFKKD V GVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360
Query: 637 AVCLKHAQSPEFKIYQNQVVANSRALANRLTEHGYKLVSGGSDNHLVLVDLRPSGIDGAR 458
AVCLKHAQSPEFK YQ QV+ NSRALANR+ E GYKLVSGGSDNHL+LVDLRP G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420
Query: 457 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADFIHEGVQIS 278
EKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG E+EF AD IHEGVQIS
Sbjct: 421 VEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQIS 480
Query: 277 LEAKSLAPGTKLQDFMNFVLSPEFPLVDKVSELRRKVEALTTQYPIPGV 131
LEAK G+KLQDF+ FV SP+FPL DKVS+LRR+VEALTTQ+PIPG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529