BLASTX nr result

ID: Glycyrrhiza23_contig00000376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000376
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41712.1| unknown [Medicago truncatula]                          165   2e-38
ref|XP_002272584.1| PREDICTED: photosystem I reaction center sub...   164   5e-38
emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]   162   2e-37
gb|ACJ83279.1| unknown [Medicago truncatula]                          162   2e-37
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub...   161   3e-37

>gb|AFK41712.1| unknown [Medicago truncatula]
          Length = 224

 Score =  165 bits (417), Expect = 2e-38
 Identities = 75/81 (92%), Positives = 80/81 (98%)
 Frame = +2

Query: 560 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRG 739
           NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLA+RLVFRG
Sbjct: 144 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASRLVFRG 203

Query: 740 FSWPVAAYREFLNGELVAKDV 802
           FSWP+AAYRE +NGEL+AKDV
Sbjct: 204 FSWPIAAYRELVNGELIAKDV 224



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 49/95 (51%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +3

Query: 150 MSLTIPTNLSKPT-TLRPKLTQKPRPTATIL-CSTTTNPNHENTDXXXXXXXXXXXXXXX 323
           MSLTIPTNLSKPT TLRPKL QKP+ +  I+ CST  N      D               
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCST--NQEKPTNDVNSNLKAFSAALALS 58

Query: 324 XXXXXXXXXXXXDISGLTPCKESKQFAKREKQQIK 428
                       DISGLTPC+ESKQFAKREKQ IK
Sbjct: 59  SILISSPLPAVADISGLTPCRESKQFAKREKQSIK 93


>ref|XP_002272584.1| PREDICTED: photosystem I reaction center subunit III, chloroplastic
           isoform 1 [Vitis vinifera]
           gi|359495313|ref|XP_003634953.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic isoform 2
           [Vitis vinifera]
          Length = 221

 Score =  164 bits (414), Expect = 5e-38
 Identities = 75/81 (92%), Positives = 80/81 (98%)
 Frame = +2

Query: 560 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRG 739
           +GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLA+RLVFRG
Sbjct: 141 SGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLASRLVFRG 200

Query: 740 FSWPVAAYREFLNGELVAKDV 802
           F WPVAAYREF+NG+L+AKDV
Sbjct: 201 FIWPVAAYREFVNGDLIAKDV 221



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 45/97 (46%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = +3

Query: 150 MSLTIPTNLSKPTTLRPKLT----QKPRPTATILCSTTTNPNHENTDXXXXXXXXXXXXX 317
           MSLTIPTNLSKP  L+P+L+    QK RP   I+CS +T P   N               
Sbjct: 1   MSLTIPTNLSKP--LKPRLSSPSFQKARPM--IVCSASTEPQPTNKSPLQAFSAALALSS 56

Query: 318 XXXXXXXXXXXXXXDISGLTPCKESKQFAKREKQQIK 428
                         DI+GLTPCKESKQFAKREKQ +K
Sbjct: 57  IILAAPVPAYA---DIAGLTPCKESKQFAKREKQALK 90


>emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]
          Length = 221

 Score =  162 bits (410), Expect = 2e-37
 Identities = 74/81 (91%), Positives = 80/81 (98%)
 Frame = +2

Query: 560 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRG 739
           +GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLA+RLVFRG
Sbjct: 141 SGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASRLVFRG 200

Query: 740 FSWPVAAYREFLNGELVAKDV 802
           F WPVAAYREF+NG+L+AKDV
Sbjct: 201 FIWPVAAYREFVNGDLIAKDV 221



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 45/97 (46%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = +3

Query: 150 MSLTIPTNLSKPTTLRPKLT----QKPRPTATILCSTTTNPNHENTDXXXXXXXXXXXXX 317
           MSLTIPTNLSKP  L+P+L+    QK RP   I+CS +T P   N               
Sbjct: 1   MSLTIPTNLSKP--LKPRLSSPSFQKARPM--IVCSASTEPQPTNKSPLQAFSAALALSS 56

Query: 318 XXXXXXXXXXXXXXDISGLTPCKESKQFAKREKQQIK 428
                         DI+GLTPCKESKQFAKREKQ +K
Sbjct: 57  IILAAPVPAYA---DIAGLTPCKESKQFAKREKQALK 90


>gb|ACJ83279.1| unknown [Medicago truncatula]
          Length = 224

 Score =  162 bits (409), Expect = 2e-37
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = +2

Query: 560 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRG 739
           NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDV LA+RLVFRG
Sbjct: 144 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVTLASRLVFRG 203

Query: 740 FSWPVAAYREFLNGELVAKDV 802
           FSWP+AAYRE +NGEL+AKDV
Sbjct: 204 FSWPIAAYRELVNGELIAKDV 224



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 49/95 (51%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +3

Query: 150 MSLTIPTNLSKPT-TLRPKLTQKPRPTATIL-CSTTTNPNHENTDXXXXXXXXXXXXXXX 323
           MSLTIPTNLSKPT TLRPKL QKP+ +  I+ CST  N      D               
Sbjct: 1   MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCST--NQEKPTNDVNSNLKAFSAALALS 58

Query: 324 XXXXXXXXXXXXDISGLTPCKESKQFAKREKQQIK 428
                       DISGLTPC+ESKQFAKREKQ IK
Sbjct: 59  SILISSPLPAVADISGLTPCRESKQFAKREKQSIK 93


>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
           gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic-like
           [Cucumis sativus]
          Length = 224

 Score =  161 bits (407), Expect = 3e-37
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = +2

Query: 560 NGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRG 739
           +GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLAT LVFRG
Sbjct: 144 SGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATSLVFRG 203

Query: 740 FSWPVAAYREFLNGELVAKDV 802
           FSWPVAAYRE +NGEL+AKDV
Sbjct: 204 FSWPVAAYRELVNGELIAKDV 224



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 48/97 (49%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = +3

Query: 150 MSLTIPTNLSKPTTLRPK----LTQKPRPTATILCSTTTNPNHENTDXXXXXXXXXXXXX 317
           MSLTIPTNLSKP  L+PK    L  KP+P+++ILCS + N N   +              
Sbjct: 1   MSLTIPTNLSKPL-LKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSS 59

Query: 318 XXXXXXXXXXXXXXDISGLTPCKESKQFAKREKQQIK 428
                         DISGLTPCKESKQFAKREKQQIK
Sbjct: 60  ILLSAPLPAVA---DISGLTPCKESKQFAKREKQQIK 93


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