BLASTX nr result

ID: Glycyrrhiza23_contig00000374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000374
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551288.1| PREDICTED: REF/SRPP-like protein At1g67360-l...   114   8e-24
gb|ACU19020.1| unknown [Glycine max]                                  114   8e-24
gb|AFK45887.1| unknown [Lotus japonicus]                              111   7e-23
ref|XP_003601786.1| REF/SRPP-like protein [Medicago truncatula] ...   107   8e-22
ref|XP_003538549.1| PREDICTED: REF/SRPP-like protein At1g67360-l...   107   1e-21

>ref|XP_003551288.1| PREDICTED: REF/SRPP-like protein At1g67360-like isoform 1 [Glycine
           max] gi|356566132|ref|XP_003551289.1| PREDICTED:
           REF/SRPP-like protein At1g67360-like isoform 2 [Glycine
           max]
          Length = 235

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +3

Query: 45  LGPVYNKFKGVPDDVLVFVDNKVDEATHKFDEHAPPFAKQLADQAKGLIQKVTHETEKVV 224
           LGPV NKFK VPDDVLVFVD KVDEA+HKFDEHAPPFAK +ADQAKG+IQKVT E  KV 
Sbjct: 63  LGPVCNKFKDVPDDVLVFVDKKVDEASHKFDEHAPPFAKHIADQAKGVIQKVTCEAGKVA 122

Query: 225 SEGRSGGP 248
           SE +SGGP
Sbjct: 123 SEAQSGGP 130


>gb|ACU19020.1| unknown [Glycine max]
          Length = 235

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +3

Query: 45  LGPVYNKFKGVPDDVLVFVDNKVDEATHKFDEHAPPFAKQLADQAKGLIQKVTHETEKVV 224
           LGPV NKFK VPDDVLVFVD KVDEA+HKFDEHAPPFAK +ADQAKG+IQKVT E  KV 
Sbjct: 63  LGPVCNKFKDVPDDVLVFVDKKVDEASHKFDEHAPPFAKHIADQAKGVIQKVTCEAGKVA 122

Query: 225 SEGRSGGP 248
           SE +SGGP
Sbjct: 123 SEAQSGGP 130


>gb|AFK45887.1| unknown [Lotus japonicus]
          Length = 230

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/81 (64%), Positives = 61/81 (75%)
 Frame = +3

Query: 3   RSAXXXXXXXXXXXLGPVYNKFKGVPDDVLVFVDNKVDEATHKFDEHAPPFAKQLADQAK 182
           RSA           LGPVYNKFKGVP+D+LVF DNKV+E THKFDEHAPP  KQ+ +QAK
Sbjct: 48  RSAVGTVEGTVTTVLGPVYNKFKGVPNDLLVFADNKVEEGTHKFDEHAPPVVKQIVNQAK 107

Query: 183 GLIQKVTHETEKVVSEGRSGG 245
           GL+ +V+H+ EKVVSE  SGG
Sbjct: 108 GLVHQVSHKAEKVVSEAHSGG 128


>ref|XP_003601786.1| REF/SRPP-like protein [Medicago truncatula]
           gi|355490834|gb|AES72037.1| REF/SRPP-like protein
           [Medicago truncatula] gi|388508766|gb|AFK42449.1|
           unknown [Medicago truncatula]
          Length = 217

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/82 (68%), Positives = 58/82 (70%)
 Frame = +3

Query: 3   RSAXXXXXXXXXXXLGPVYNKFKGVPDDVLVFVDNKVDEATHKFDEHAPPFAKQLADQAK 182
           RSA           +GPVYNKFK VPDDVLVFVDNKVDEAT KF EHAP  AKQL D+ K
Sbjct: 45  RSAVETVEGTVTTVVGPVYNKFKDVPDDVLVFVDNKVDEATDKFSEHAPHIAKQLTDKTK 104

Query: 183 GLIQKVTHETEKVVSEGRSGGP 248
             IQKVTHE  KVVS GRS GP
Sbjct: 105 YFIQKVTHEAGKVVSVGRSEGP 126


>ref|XP_003538549.1| PREDICTED: REF/SRPP-like protein At1g67360-like [Glycine max]
          Length = 236

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/81 (67%), Positives = 59/81 (72%)
 Frame = +3

Query: 3   RSAXXXXXXXXXXXLGPVYNKFKGVPDDVLVFVDNKVDEATHKFDEHAPPFAKQLADQAK 182
           RSA           LGPV NKFK  PDDVLV+VD KVDEA+HKFDEHAP FAK LADQAK
Sbjct: 49  RSAVGTVENTVTTVLGPVCNKFKDFPDDVLVYVDKKVDEASHKFDEHAPSFAKHLADQAK 108

Query: 183 GLIQKVTHETEKVVSEGRSGG 245
           G+IQKVT E  KV SE +SGG
Sbjct: 109 GVIQKVTCEAGKVASEAQSGG 129


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