BLASTX nr result

ID: Glycyrrhiza23_contig00000338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000338
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   324   2e-86
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   320   4e-85
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   319   7e-85
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot...   317   3e-84
ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   302   7e-80

>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  324 bits (831), Expect = 2e-86
 Identities = 153/168 (91%), Positives = 161/168 (95%)
 Frame = +2

Query: 164 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 343
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 344 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 523
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REE+HHKNRMKGKKQK+Q
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQ 120

Query: 524 MEAVKELQQGMDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 667
           MEA +EL+QG+ LVKAPS  QKDPSLTLPKIKVGVSQQ SE+N  MEE
Sbjct: 121 MEAARELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  320 bits (819), Expect = 4e-85
 Identities = 153/168 (91%), Positives = 160/168 (95%)
 Frame = +2

Query: 164 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 343
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 344 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 523
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REERHHKNRMKGKK+K+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 524 MEAVKELQQGMDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 667
            EAVKEL+QG+ LVKAPS  Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  319 bits (817), Expect = 7e-85
 Identities = 152/168 (90%), Positives = 159/168 (94%)
 Frame = +2

Query: 164 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 343
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 344 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 523
           KDMTQDSTFEFERKRNRPERYDRNLAENVLK IPKIDKIRVSREERHHKNRMKGKK+K+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 524 MEAVKELQQGMDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 667
            EAVKEL+QG+ LVKAPS  Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 169

 Score =  317 bits (812), Expect = 3e-84
 Identities = 153/169 (90%), Positives = 159/169 (94%), Gaps = 1/169 (0%)
 Frame = +2

Query: 164 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 343
           MRLEKCWFCSST YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG
Sbjct: 1   MRLEKCWFCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 344 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKQKVQ 523
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV+REE+HHKNRMKGKKQK+ 
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLH 120

Query: 524 MEAVKELQQGMDLVKAPSAFQKDPSLTLPKIKVGVS-QQLSEENRSMEE 667
           MEAV+EL+QG+ LVKAPS  QKDP LTLPKIKVGVS QQ SEEN  MEE
Sbjct: 121 MEAVRELEQGISLVKAPSVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE 169


>ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable ribosome biogenesis
           protein RLP24-like [Glycine max]
          Length = 174

 Score =  302 bits (774), Expect = 7e-80
 Identities = 148/174 (85%), Positives = 156/174 (89%), Gaps = 6/174 (3%)
 Frame = +2

Query: 164 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 343
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYR VHG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRXVHG 60

Query: 344 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNR------MKG 505
           KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKN+      MKG
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNKSFLTXLMKG 120

Query: 506 KKQKVQMEAVKELQQGMDLVKAPSAFQKDPSLTLPKIKVGVSQQLSEENRSMEE 667
           KK+K+  EAVKEL+ G+ LVKA    Q+DPSLTLPKIKV VSQQ SEEN +MEE
Sbjct: 121 KKEKLLKEAVKELEXGISLVKARYVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 174


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