BLASTX nr result

ID: Glycyrrhiza23_contig00000337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000337
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   288   6e-76
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   288   8e-76
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   277   1e-72
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot...   276   3e-72
ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   271   8e-71

>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  288 bits (737), Expect = 6e-76
 Identities = 140/151 (92%), Positives = 146/151 (96%)
 Frame = +1

Query: 1   GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 180
           GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR
Sbjct: 18  GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 77

Query: 181 PERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVHREAVKELEQSINLVKAP 360
           PERYDRNL ENVLKAIPKIDKIRV+REERHHKNRMKGKKEK+ +EAVKELEQ I+LVKAP
Sbjct: 78  PERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLLKEAVKELEQGISLVKAP 137

Query: 361 SVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 453
           SVLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 138 SVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  288 bits (736), Expect = 8e-76
 Identities = 140/151 (92%), Positives = 145/151 (96%)
 Frame = +1

Query: 1   GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 180
           GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR
Sbjct: 18  GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 77

Query: 181 PERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVHREAVKELEQSINLVKAP 360
           PERYDRNL ENVLK IPKIDKIRVSREERHHKNRMKGKKEK+ +EAVKELEQ I+LVKAP
Sbjct: 78  PERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLLKEAVKELEQGISLVKAP 137

Query: 361 SVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 453
           SVLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 138 SVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  277 bits (708), Expect = 1e-72
 Identities = 133/151 (88%), Positives = 143/151 (94%)
 Frame = +1

Query: 1   GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 180
           GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR
Sbjct: 18  GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 77

Query: 181 PERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVHREAVKELEQSINLVKAP 360
           PERYDRNL ENVLKAIPKIDKIRV+REE+HHKNRMKGKK+K+  EA +ELEQ I+LVKAP
Sbjct: 78  PERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQMEAARELEQGISLVKAP 137

Query: 361 SVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 453
           SVLQ++PSLTLPK KV VSQQQ+E+NH MEE
Sbjct: 138 SVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 169

 Score =  276 bits (705), Expect = 3e-72
 Identities = 135/152 (88%), Positives = 144/152 (94%), Gaps = 1/152 (0%)
 Frame = +1

Query: 1   GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 180
           GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR
Sbjct: 18  GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 77

Query: 181 PERYDRNLTENVLKAIPKIDKIRVSREERHHKNRMKGKKEKVHREAVKELEQSINLVKAP 360
           PERYDRNL ENVLKAIPKIDKIRV+REE+HHKNRMKGKK+K+H EAV+ELEQ I+LVKAP
Sbjct: 78  PERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLHMEAVRELEQGISLVKAP 137

Query: 361 SVLQQEPSLTLPKTKVKVS-QQQAEENHLMEE 453
           SVLQ++P LTLPK KV VS QQQ+EENH MEE
Sbjct: 138 SVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE 169


>ref|XP_003535810.1| PREDICTED: LOW QUALITY PROTEIN: probable ribosome biogenesis
           protein RLP24-like [Glycine max]
          Length = 174

 Score =  271 bits (693), Expect = 8e-71
 Identities = 136/157 (86%), Positives = 142/157 (90%), Gaps = 6/157 (3%)
 Frame = +1

Query: 1   GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNR 180
           GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYR VHGKDMTQDSTFEFERKRNR
Sbjct: 18  GIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRXVHGKDMTQDSTFEFERKRNR 77

Query: 181 PERYDRNLTENVLKAIPKIDKIRVSREERHHKNR------MKGKKEKVHREAVKELEQSI 342
           PERYDRNL ENVLKAIPKIDKIRVSREERHHKN+      MKGKKEK+ +EAVKELE  I
Sbjct: 78  PERYDRNLAENVLKAIPKIDKIRVSREERHHKNKSFLTXLMKGKKEKLLKEAVKELEXGI 137

Query: 343 NLVKAPSVLQQEPSLTLPKTKVKVSQQQAEENHLMEE 453
           +LVKA  VLQQ+PSLTLPK KVKVSQQQ+EENH MEE
Sbjct: 138 SLVKARYVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 174


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