BLASTX nr result

ID: Glycyrrhiza23_contig00000307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000307
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36101.1| unknown [Lotus japonicus]                              210   5e-52
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   210   5e-52
gb|AFK45541.1| unknown [Medicago truncatula]                          209   6e-52
ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   206   9e-51
ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   204   2e-50

>gb|AFK36101.1| unknown [Lotus japonicus]
          Length = 298

 Score =  210 bits (534), Expect = 5e-52
 Identities = 107/129 (82%), Positives = 113/129 (87%)
 Frame = -3

Query: 981 EWARAQNPTSLVEFSSREGEVEGKLKDIAARAGRKGEFSYSRFFAVGLFRLLELANAMEP 802
           EWAR Q+ TSL+EFSSREGEVEG LKDIA RAG KG+FSYSRFFA+GLFRLLEL NAMEP
Sbjct: 165 EWARTQSSTSLIEFSSREGEVEGALKDIAERAGGKGDFSYSRFFAIGLFRLLELGNAMEP 224

Query: 801 TILEKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDXXXXXXXXRAEPQKANE 622
            ILEKLCAALN+DKRSVDRDLDVYRNLLSKLVQAKELLKEY D        RAEPQKANE
Sbjct: 225 AILEKLCAALNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYADREKKKQEERAEPQKANE 284

Query: 621 AITKCLGQQ 595
           AITKCLGQ+
Sbjct: 285 AITKCLGQE 293


>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  210 bits (534), Expect = 5e-52
 Identities = 110/133 (82%), Positives = 115/133 (86%)
 Frame = -3

Query: 981 EWARAQNPTSLVEFSSREGEVEGKLKDIAARAGRKGEFSYSRFFAVGLFRLLELANAMEP 802
           EWAR Q PTSLVEFSS+EGEVEG LKDIA RAG KGEFSYSRFFAVGLFRLLELANA EP
Sbjct: 165 EWARVQKPTSLVEFSSKEGEVEGILKDIAERAGGKGEFSYSRFFAVGLFRLLELANATEP 224

Query: 801 TILEKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDXXXXXXXXRAEPQKANE 622
           TIL+KLC ALNI+KRSVDRDLDVYR LLSKLVQAKELLKEY+D        RAEPQKANE
Sbjct: 225 TILDKLCVALNINKRSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERAEPQKANE 284

Query: 621 AITKCLGQQLSGV 583
           AIT CLGQQL G+
Sbjct: 285 AITTCLGQQLPGL 297


>gb|AFK45541.1| unknown [Medicago truncatula]
          Length = 303

 Score =  209 bits (533), Expect = 6e-52
 Identities = 107/129 (82%), Positives = 115/129 (89%)
 Frame = -3

Query: 981 EWARAQNPTSLVEFSSREGEVEGKLKDIAARAGRKGEFSYSRFFAVGLFRLLELANAMEP 802
           EWARAQN TSL+EFSSREGEVEG LKDIA RAG  G+FSYSRFFAVGLFRLLELAN MEP
Sbjct: 167 EWARAQNATSLIEFSSREGEVEGTLKDIAERAGGNGDFSYSRFFAVGLFRLLELANTMEP 226

Query: 801 TILEKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDXXXXXXXXRAEPQKANE 622
           TILEKLC+ALNI+K+SVDRDLDVYRNLLSKLVQAKELLKEY+D        RAEPQKANE
Sbjct: 227 TILEKLCSALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKIEERAEPQKANE 286

Query: 621 AITKCLGQQ 595
           AI+KCLGQ+
Sbjct: 287 AISKCLGQE 295


>ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  206 bits (523), Expect = 9e-51
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = -3

Query: 981 EWARAQNPTSLVEFSSREGEVEGKLKDIAARAGRKGEFSYSRFFAVGLFRLLELANAMEP 802
           EWARAQNPTSLV+FSSREGEVEG LKDIA RAG KG+FSYSRFFA+GLFRLLELANAMEP
Sbjct: 161 EWARAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEP 220

Query: 801 TILEKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDXXXXXXXXRAEPQKANE 622
           TILEKLCA LN+DKRSVDRDLDVYRNLLSKLVQAKELLKEYVD        RAEPQK+NE
Sbjct: 221 TILEKLCAVLNVDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNE 280

Query: 621 AITK 610
           AIT+
Sbjct: 281 AITQ 284


>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  204 bits (520), Expect = 2e-50
 Identities = 107/133 (80%), Positives = 114/133 (85%)
 Frame = -3

Query: 981 EWARAQNPTSLVEFSSREGEVEGKLKDIAARAGRKGEFSYSRFFAVGLFRLLELANAMEP 802
           EWAR Q+PTSLVEFSS+EGE E  LKDIA RAG KGEFSYSRFFAVGLFRL+ELANA EP
Sbjct: 165 EWARVQSPTSLVEFSSKEGEAERILKDIAERAGGKGEFSYSRFFAVGLFRLVELANATEP 224

Query: 801 TILEKLCAALNIDKRSVDRDLDVYRNLLSKLVQAKELLKEYVDXXXXXXXXRAEPQKANE 622
           TIL+KLCAALNI+KRSVDRDLDVYR LLSKLVQAKELLKEY+D        R EPQKANE
Sbjct: 225 TILDKLCAALNINKRSVDRDLDVYRILLSKLVQAKELLKEYIDREKKKRDERVEPQKANE 284

Query: 621 AITKCLGQQLSGV 583
           AIT CLGQQL G+
Sbjct: 285 AITTCLGQQLHGL 297