BLASTX nr result

ID: Glycyrrhiza23_contig00000293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000293
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41481.1| unknown [Lotus japonicus]                              287   2e-75
ref|XP_003529684.1| PREDICTED: 40S ribosomal protein S15-like [G...   286   3e-75
ref|XP_003550995.1| PREDICTED: 40S ribosomal protein S15-like is...   286   4e-75
ref|NP_001235950.1| uncharacterized protein LOC100499781 [Glycin...   286   5e-75
gb|AFK41893.1| unknown [Lotus japonicus]                              284   1e-74

>gb|AFK41481.1| unknown [Lotus japonicus]
          Length = 153

 Score =  287 bits (734), Expect = 2e-75
 Identities = 147/153 (96%), Positives = 147/153 (96%), Gaps = 4/153 (2%)
 Frame = -2

Query: 704 MADAEVDVAQ----PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRK 537
           MAD EVDVA     PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRK
Sbjct: 1   MADVEVDVAAAGGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRK 60

Query: 536 PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 357
           PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 356 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 258
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153


>ref|XP_003529684.1| PREDICTED: 40S ribosomal protein S15-like [Glycine max]
          Length = 158

 Score =  286 bits (733), Expect = 3e-75
 Identities = 147/158 (93%), Positives = 148/158 (93%), Gaps = 9/158 (5%)
 Frame = -2

Query: 704 MADAEVDVA---------QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQR 552
           MAD EVDVA         QPKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQR
Sbjct: 1   MADVEVDVAAAAAAAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQR 60

Query: 551 GLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 372
           GLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI
Sbjct: 61  GLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 120

Query: 371 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 258
           KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 158


>ref|XP_003550995.1| PREDICTED: 40S ribosomal protein S15-like isoform 1 [Glycine max]
           gi|356565537|ref|XP_003550996.1| PREDICTED: 40S
           ribosomal protein S15-like isoform 2 [Glycine max]
          Length = 155

 Score =  286 bits (732), Expect = 4e-75
 Identities = 146/155 (94%), Positives = 147/155 (94%), Gaps = 6/155 (3%)
 Frame = -2

Query: 704 MADAEVDVA------QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLT 543
           MAD EVD A      QPKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLT
Sbjct: 1   MADVEVDAAAAAGAAQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLT 60

Query: 542 RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 363
           RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE
Sbjct: 61  RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 120

Query: 362 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 258
           MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 155


>ref|NP_001235950.1| uncharacterized protein LOC100499781 [Glycine max]
           gi|255626483|gb|ACU13586.1| unknown [Glycine max]
          Length = 155

 Score =  286 bits (731), Expect = 5e-75
 Identities = 146/155 (94%), Positives = 147/155 (94%), Gaps = 6/155 (3%)
 Frame = -2

Query: 704 MADAEVDVA------QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLT 543
           MAD EVDVA      QPKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLT
Sbjct: 1   MADVEVDVAAAAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLT 60

Query: 542 RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 363
           RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE
Sbjct: 61  RKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 120

Query: 362 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 258
           MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 155


>gb|AFK41893.1| unknown [Lotus japonicus]
          Length = 151

 Score =  284 bits (727), Expect = 1e-74
 Identities = 145/151 (96%), Positives = 145/151 (96%), Gaps = 2/151 (1%)
 Frame = -2

Query: 704 MADAEVDVAQ--PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM 531
           MAD E DVA   PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM
Sbjct: 1   MADVETDVAAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM 60

Query: 530 ALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 351
           ALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH
Sbjct: 61  ALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 120

Query: 350 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 258
           YLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151


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