BLASTX nr result

ID: Glycyrrhiza23_contig00000264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000264
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34359.1| unknown [Lotus japonicus] gi|388505376|gb|AFK4075...    84   4e-27
ref|NP_001236556.1| uncharacterized protein LOC100306291 [Glycin...    82   7e-27
gb|ACO24551.1| chloroplast photosystem II subunit X [Vigna radiata]    84   7e-26
ref|XP_003533778.1| PREDICTED: uncharacterized protein LOC100792...    80   2e-25
ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-22

>gb|AFK34359.1| unknown [Lotus japonicus] gi|388505376|gb|AFK40754.1| unknown
           [Lotus japonicus]
          Length = 119

 Score = 83.6 bits (205), Expect(2) = 4e-27
 Identities = 51/83 (61%), Positives = 54/83 (65%)
 Frame = -1

Query: 484 KAVAASEFKGRFQVRASMKEKVVTGXXXXXXXASMMVPDVAEAATVSPSLKNFLLSXXXX 305
           +A AAS+  GRFQVRASMKEKVVTG       ASMMVPDVAEAA VSPSLKNFLLS    
Sbjct: 38  RAAAASKSSGRFQVRASMKEKVVTGLTAAAMTASMMVPDVAEAA-VSPSLKNFLLSIAAG 96

Query: 304 XXXXXXXXXXXXXXANFDPVKRG 236
                         +NFDPVKRG
Sbjct: 97  GVVLVVIIGAVVGVSNFDPVKRG 119



 Score = 65.1 bits (157), Expect(2) = 4e-27
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 666 MASTSTVSMAMPLTHASQKRVVPSSEAFFKPLPLRSS 556
           MASTS VSMAMPLTHASQ+RVVP+SEAFFKP+ LRSS
Sbjct: 1   MASTSAVSMAMPLTHASQQRVVPTSEAFFKPMHLRSS 37


>ref|NP_001236556.1| uncharacterized protein LOC100306291 [Glycine max]
           gi|255628121|gb|ACU14405.1| unknown [Glycine max]
          Length = 119

 Score = 82.0 bits (201), Expect(2) = 7e-27
 Identities = 50/82 (60%), Positives = 53/82 (64%)
 Frame = -1

Query: 484 KAVAASEFKGRFQVRASMKEKVVTGXXXXXXXASMMVPDVAEAATVSPSLKNFLLSXXXX 305
           KAV AS+  GRFQVRASMKEKVVTG       ASMMVPDVAEAA V+PSLKNFLLS    
Sbjct: 38  KAVTASKLNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAA-VTPSLKNFLLSIAAG 96

Query: 304 XXXXXXXXXXXXXXANFDPVKR 239
                         +NFDPVKR
Sbjct: 97  GVVVVAIIGAVIGVSNFDPVKR 118



 Score = 65.9 bits (159), Expect(2) = 7e-27
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -2

Query: 666 MASTSTVSMAMPLTHASQKRVVPSSEAFFKPLPLRSS 556
           MASTS VSM MP+T+ASQKRVVPSS+AFFKPLPLRSS
Sbjct: 1   MASTSAVSMVMPVTYASQKRVVPSSDAFFKPLPLRSS 37


>gb|ACO24551.1| chloroplast photosystem II subunit X [Vigna radiata]
          Length = 120

 Score = 84.3 bits (207), Expect(2) = 7e-26
 Identities = 50/82 (60%), Positives = 52/82 (63%)
 Frame = -1

Query: 484 KAVAASEFKGRFQVRASMKEKVVTGXXXXXXXASMMVPDVAEAATVSPSLKNFLLSXXXX 305
           KA+ AS   GRFQVRASMKEKVVTG       ASMM PDVAEAA+VSPSLKNFLLS    
Sbjct: 38  KALTASNTNGRFQVRASMKEKVVTGLTAAALTASMMAPDVAEAASVSPSLKNFLLSIAAG 97

Query: 304 XXXXXXXXXXXXXXANFDPVKR 239
                         ANFDPVKR
Sbjct: 98  GVVVVAIIGVVIGVANFDPVKR 119



 Score = 60.1 bits (144), Expect(2) = 7e-26
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = -2

Query: 666 MASTSTVSMAMPLTHASQKRVVPSSEAFFKPLPLRSS 556
           MASTS +SMAMP+T AS K+VVP+S+AFFKPLPLRSS
Sbjct: 1   MASTSALSMAMPVTCASHKKVVPTSDAFFKPLPLRSS 37


>ref|XP_003533778.1| PREDICTED: uncharacterized protein LOC100792794 [Glycine max]
          Length = 119

 Score = 80.5 bits (197), Expect(2) = 2e-25
 Identities = 50/82 (60%), Positives = 51/82 (62%)
 Frame = -1

Query: 484 KAVAASEFKGRFQVRASMKEKVVTGXXXXXXXASMMVPDVAEAATVSPSLKNFLLSXXXX 305
           K VAAS   GRFQVR SMKEKVVTG       ASMMVPDVAEAA VSPSLKNFLLS    
Sbjct: 38  KVVAASNSNGRFQVRTSMKEKVVTGLTAAALTASMMVPDVAEAA-VSPSLKNFLLSIAAG 96

Query: 304 XXXXXXXXXXXXXXANFDPVKR 239
                         +NFDPVKR
Sbjct: 97  GVVVVAIIGAVIGVSNFDPVKR 118



 Score = 62.8 bits (151), Expect(2) = 2e-25
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 666 MASTSTVSMAMPLTHASQKRVVPSSEAFFKPLPLRSS 556
           MASTS VSM MP+T+ASQKRVVPSS+AFFKPL LRSS
Sbjct: 1   MASTSAVSMVMPVTYASQKRVVPSSDAFFKPLTLRSS 37


>ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|222833307|gb|EEE71784.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 75.9 bits (185), Expect(2) = 2e-22
 Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = -1

Query: 484 KAVAASEFKGRFQVRASMKEKVVTGXXXXXXXASMMVPDVAEA--ATVSPSLKNFLLSXX 311
           KA++AS+  GRFQV+AS+KEK+VTG       ASM++PDVAEA  A  SPSLKNFLLS  
Sbjct: 37  KAMSASKSSGRFQVKASLKEKLVTGLTAGALTASMVIPDVAEAAGAGASPSLKNFLLSIV 96

Query: 310 XXXXXXXXXXXXXXXXANFDPVKRG 236
                           +NFDPVKRG
Sbjct: 97  AGGVVLVAIIGAVIGVSNFDPVKRG 121



 Score = 57.0 bits (136), Expect(2) = 2e-22
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 666 MASTSTVSMAMPLTHASQKRVVPSSEAFFKPLPLRSS 556
           MASTS VSMA+PLT+ASQKR +P+SEAFFKPLP R S
Sbjct: 1   MASTSAVSMALPLTYASQKR-IPASEAFFKPLPARPS 36


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