BLASTX nr result

ID: Glycyrrhiza23_contig00000237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000237
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236263.1| uncharacterized protein LOC100499804 [Glycin...   187   2e-45
ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like ...   184   2e-44
ref|XP_003518144.1| PREDICTED: 40S ribosomal protein S27-2-like ...   182   8e-44
ref|XP_002512685.1| 40S ribosomal protein S27, putative [Ricinus...   181   2e-43
gb|ACJ86187.1| unknown [Medicago truncatula] gi|388490658|gb|AFK...   181   2e-43

>ref|NP_001236263.1| uncharacterized protein LOC100499804 [Glycine max]
           gi|255626769|gb|ACU13729.1| unknown [Glycine max]
          Length = 90

 Score =  187 bits (475), Expect = 2e-45
 Identities = 88/90 (97%), Positives = 89/90 (98%)
 Frame = -2

Query: 610 MVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 431
           MVLQNDIDLLNPPAE+EKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 430 CQTVLCQPTGGRARLTEGCSFRKKGD*MVC 341
           CQTVLCQPTGGRARLTEGCSFRKKGD MVC
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRKKGDWMVC 90


>ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like [Cucumis sativus]
           gi|449487447|ref|XP_004157631.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Cucumis sativus]
          Length = 161

 Score =  184 bits (467), Expect = 2e-44
 Identities = 90/110 (81%), Positives = 96/110 (87%)
 Frame = -2

Query: 682 ICYFSFRVFIFLVFS*LLQNRFANMVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMD 503
           I  FSFR++I L+          N VLQNDIDLLNPPAE+EKRKHKLKRLVQSPNSFFMD
Sbjct: 57  ISLFSFRIWIQLI-----SVSSFNQVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMD 111

Query: 502 VKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 353
           VKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRA+LTEGCSFR+KGD
Sbjct: 112 VKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRAKLTEGCSFRRKGD 161


>ref|XP_003518144.1| PREDICTED: 40S ribosomal protein S27-2-like [Glycine max]
           gi|356559502|ref|XP_003548038.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Glycine max]
           gi|356571649|ref|XP_003553988.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Glycine max]
           gi|357446939|ref|XP_003593745.1| Ribosomal protein S27
           [Medicago truncatula] gi|217071544|gb|ACJ84132.1|
           unknown [Medicago truncatula]
           gi|355482793|gb|AES63996.1| Ribosomal protein S27
           [Medicago truncatula] gi|388495100|gb|AFK35616.1|
           unknown [Lotus japonicus] gi|388522401|gb|AFK49262.1|
           unknown [Medicago truncatula]
          Length = 86

 Score =  182 bits (461), Expect = 8e-44
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = -2

Query: 610 MVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 431
           MVLQNDIDLLNPPAE+EKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 430 CQTVLCQPTGGRARLTEGCSFRKKGD 353
           CQTVLCQPTGGRARLTEGCSFRKKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRKKGD 86


>ref|XP_002512685.1| 40S ribosomal protein S27, putative [Ricinus communis]
           gi|255556735|ref|XP_002519401.1| 40S ribosomal protein
           S27, putative [Ricinus communis]
           gi|449452042|ref|XP_004143769.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Cucumis sativus]
           gi|449525069|ref|XP_004169542.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Cucumis sativus]
           gi|223541468|gb|EEF43018.1| 40S ribosomal protein S27,
           putative [Ricinus communis] gi|223548646|gb|EEF50137.1|
           40S ribosomal protein S27, putative [Ricinus communis]
          Length = 86

 Score =  181 bits (458), Expect = 2e-43
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = -2

Query: 610 MVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 431
           MVLQNDIDLLNPPAE+EKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 430 CQTVLCQPTGGRARLTEGCSFRKKGD 353
           CQTVLCQPTGGRARLTEGCSFR+KGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>gb|ACJ86187.1| unknown [Medicago truncatula] gi|388490658|gb|AFK33395.1| unknown
           [Medicago truncatula] gi|388509374|gb|AFK42753.1|
           unknown [Medicago truncatula]
          Length = 86

 Score =  181 bits (458), Expect = 2e-43
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = -2

Query: 610 MVLQNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 431
           MVLQNDIDLLNPPAE+EKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 430 CQTVLCQPTGGRARLTEGCSFRKKGD 353
           CQTVLCQPTGG+ARLTEGCSFRKKGD
Sbjct: 61  CQTVLCQPTGGKARLTEGCSFRKKGD 86


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