BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000235
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteo...   392   e-107
ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteo...   390   e-106
gb|AFK33568.1| unknown [Lotus japonicus]                              389   e-105
ref|XP_003612602.1| ATP-dependent Clp protease proteolytic subun...   387   e-105
ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subun...   347   4e-93

>ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic-like [Glycine max]
          Length = 306

 Score =  392 bits (1008), Expect = e-107
 Identities = 204/262 (77%), Positives = 220/262 (83%), Gaps = 5/262 (1%)
 Frame = +2

Query: 188 RTPLRCVLTPLTKPSKNSNFGYQPEKPGITFQLSAPQTPNKAMRGAESDVMGLLLRERIV 367
           +TP RCV T    PSK  NFG Q   PG+TF+LSAPQTP+ A RGAE DVMGLLLRERIV
Sbjct: 45  KTPARCVFTASPIPSKIPNFGSQSRNPGLTFELSAPQTPSTAARGAEGDVMGLLLRERIV 104

Query: 368 FLGTNIDDFVADAIMSQLLLLDAQDPTKDIKLFINSSGGSLSSTMAIYDAVQLVRADVST 547
           FLG++IDDFVADAIMSQLLLLDA DPTKDI+LFINS+GGSLS+TMAIYDAVQLVRADVST
Sbjct: 105 FLGSSIDDFVADAIMSQLLLLDALDPTKDIRLFINSTGGSLSATMAIYDAVQLVRADVST 164

Query: 548 IALGIAASTASILLGGGTKGKRLAMPNTRIMITQPPGGASGQAIDVEIQAKEVMHNKNNI 727
           +ALGIAASTAS++LGGGTKGKR AMPNTRIM+ QP GGASGQAIDVEIQAKEVMHNKNNI
Sbjct: 165 VALGIAASTASVILGGGTKGKRFAMPNTRIMVHQPLGGASGQAIDVEIQAKEVMHNKNNI 224

Query: 728 TRIISGFTGRSFEQVQKDIDRDRYLSPIEAVEYXXXXXXXXXXXXXPLMPVPERVEPALN 907
           TRIIS FTGRSFEQVQKDIDRD+Y+SPIEAVEY             PLMPVPERV+  LN
Sbjct: 225 TRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVIDRDSIIPLMPVPERVKSTLN 284

Query: 908 YEE-----EKMLTPDIPDDEIY 958
           YEE      K LTPDIPDDEIY
Sbjct: 285 YEEISKDPRKFLTPDIPDDEIY 306


>ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic-like [Glycine max]
          Length = 306

 Score =  390 bits (1001), Expect = e-106
 Identities = 205/264 (77%), Positives = 223/264 (84%), Gaps = 7/264 (2%)
 Frame = +2

Query: 188 RTPLRCVLTPLTK-PSKNSNFGYQPEKP-GITFQLSAPQTPNKAMRGAESDVMGLLLRER 361
           +TP RCV TP +  PSKN NFG Q   P  +TF+LS+PQTP+ A RGAE DVMGLLLRER
Sbjct: 43  KTPPRCVFTPASPIPSKNPNFGSQSRNPTSLTFELSSPQTPSTAARGAEGDVMGLLLRER 102

Query: 362 IVFLGTNIDDFVADAIMSQLLLLDAQDPTKDIKLFINSSGGSLSSTMAIYDAVQLVRADV 541
           IVFLG++IDDFVADAIMSQ+LLLDAQDPTKDI+LFINS+GGSLS+TMAIYDAVQLVRADV
Sbjct: 103 IVFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLFINSTGGSLSATMAIYDAVQLVRADV 162

Query: 542 STIALGIAASTASILLGGGTKGKRLAMPNTRIMITQPPGGASGQAIDVEIQAKEVMHNKN 721
           ST+ALGIAASTAS++LGGGTKGKR AMPNTRIMI QP GGASGQAIDVEIQAKEVMHNKN
Sbjct: 163 STVALGIAASTASVILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKN 222

Query: 722 NITRIISGFTGRSFEQVQKDIDRDRYLSPIEAVEYXXXXXXXXXXXXXPLMPVPERVEPA 901
           NITRIIS FTGRSFEQVQKDIDRD+Y+SPIEAVEY             PLMPVPERV+  
Sbjct: 223 NITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVIDRDSIIPLMPVPERVKST 282

Query: 902 LNYEE-----EKMLTPDIPDDEIY 958
           LNYEE      K LTPDIPDDEIY
Sbjct: 283 LNYEEISKDPRKFLTPDIPDDEIY 306


>gb|AFK33568.1| unknown [Lotus japonicus]
          Length = 308

 Score =  389 bits (999), Expect = e-105
 Identities = 210/288 (72%), Positives = 226/288 (78%), Gaps = 5/288 (1%)
 Frame = +2

Query: 110 FSKPPISFFNXXXXXXXXXXXXXXXXRTPLRCVLTPLTKPSKNSNFGYQPEKPGITFQLS 289
           FSKPP S FN                 TPL+C+LT     SKN+NF  +  KP ITFQ+S
Sbjct: 26  FSKPPTSSFNPKPSSPSPCHRT-----TPLKCILTASPNHSKNANFEPESLKPRITFQMS 80

Query: 290 APQTPNKAMRGAESDVMGLLLRERIVFLGTNIDDFVADAIMSQLLLLDAQDPTKDIKLFI 469
           +PQTP  A+RGAE+D M LLLRERIVFLG+ IDDFVADAIMSQLLLLDAQDP+KDIKLFI
Sbjct: 81  SPQTPATAIRGAETDAMWLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFI 140

Query: 470 NSSGGSLSSTMAIYDAVQLVRADVSTIALGIAASTASILLGGGTKGKRLAMPNTRIMITQ 649
           NS GGSLS+TMAIYDAVQLVRADVSTIALGIAASTASI+LGGGTKGKR AMPNTRIMI Q
Sbjct: 141 NSPGGSLSATMAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQ 200

Query: 650 PPGGASGQAIDVEIQAKEVMHNKNNITRIISGFTGRSFEQVQKDIDRDRYLSPIEAVEYX 829
           P GGASGQAIDVEIQAKEVMHNKNN+TRIISGFTGR+FEQVQKDIDRDRY+SPIEAVEY 
Sbjct: 201 PLGGASGQAIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYG 260

Query: 830 XXXXXXXXXXXXPLMPVPERVEPALNYEE-----EKMLTPDIPDDEIY 958
                       PL PVPERV   LNYEE      K LTP+IPDDEIY
Sbjct: 261 IIDGVIDKESIIPLEPVPERVRSTLNYEEISKDPRKFLTPEIPDDEIY 308


>ref|XP_003612602.1| ATP-dependent Clp protease proteolytic subunit [Medicago
           truncatula] gi|355513937|gb|AES95560.1| ATP-dependent
           Clp protease proteolytic subunit [Medicago truncatula]
           gi|388495738|gb|AFK35935.1| unknown [Medicago
           truncatula]
          Length = 297

 Score =  387 bits (993), Expect = e-105
 Identities = 208/284 (73%), Positives = 225/284 (79%), Gaps = 1/284 (0%)
 Frame = +2

Query: 110 FSKPPISFFNXXXXXXXXXXXXXXXXRTPLRCVLTPLTKPSKNSNFGYQPEKPGITFQLS 289
           FSKP IS FN                 TP+ CVLT    PSKN NF  Q +KP ITFQLS
Sbjct: 18  FSKPTISSFNSKPHFPLQFSQFRT---TPINCVLTT-PSPSKNPNFNPQLQKPSITFQLS 73

Query: 290 APQTPNKAMRGAESDVMGLLLRERIVFLGTNIDDFVADAIMSQLLLLDAQDPTKDIKLFI 469
           +PQTP +A+RGAESD MGLLLRERIVFLG+ IDDFVADAIMSQLLLLDAQDPTKDIKLFI
Sbjct: 74  SPQTPERAIRGAESDTMGLLLRERIVFLGSEIDDFVADAIMSQLLLLDAQDPTKDIKLFI 133

Query: 470 NSSGGSLSSTMAIYDAVQLVRADVSTIALGIAASTASILLGGGTKGKRLAMPNTRIMITQ 649
           NS GGSLS+TMAIYDAVQLVRADVSTIA+GI+ASTASI+LGGGTKGKRLAMPNTRIMI Q
Sbjct: 134 NSPGGSLSATMAIYDAVQLVRADVSTIAMGISASTASIILGGGTKGKRLAMPNTRIMIAQ 193

Query: 650 PPGGASGQAIDVEIQAKEVMHNKNNITRIISGFTGRSFEQVQKDIDRDRYLSPIEAVEYX 829
           PPGGASGQAIDVEIQAKE+MHNKNN++RIIS FTGRS EQV KDIDRDRYLSPIEAVEY 
Sbjct: 194 PPGGASGQAIDVEIQAKEIMHNKNNVSRIISSFTGRSLEQVLKDIDRDRYLSPIEAVEYG 253

Query: 830 XXXXXXXXXXXXPLMPVPERVEPA-LNYEEEKMLTPDIPDDEIY 958
                       PL+PVPE+VE A L  ++   L P IPDDEIY
Sbjct: 254 IIDGVIDREMIIPLLPVPEKVEEATLKIDDADFLNPHIPDDEIY 297


>ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223540927|gb|EEF42485.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 294

 Score =  347 bits (890), Expect = 4e-93
 Identities = 181/255 (70%), Positives = 205/255 (80%), Gaps = 6/255 (2%)
 Frame = +2

Query: 212 TPLTKPSKNSNFGYQPEKPG-ITFQLSAPQTPNKAMRGAESDVMGLLLRERIVFLGTNID 388
           +P++ P   +   +  +  G +T Q +APQTP  AMRGAESD MGLLLRERIVFLG NID
Sbjct: 40  SPISSPHNKNFPSFSIQSSGTLTPQFTAPQTPATAMRGAESDAMGLLLRERIVFLGNNID 99

Query: 389 DFVADAIMSQLLLLDAQDPTKDIKLFINSSGGSLSSTMAIYDAVQLVRADVSTIALGIAA 568
           DFVADA +SQLLLLDAQDPTKDI+LFIN  GGSLS+TMAIYD VQLVRADVST+ALGI+A
Sbjct: 100 DFVADATISQLLLLDAQDPTKDIRLFINCPGGSLSATMAIYDVVQLVRADVSTVALGISA 159

Query: 569 STASILLGGGTKGKRLAMPNTRIMITQPPGGASGQAIDVEIQAKEVMHNKNNITRIISGF 748
           STASI+LGGGTKGKR AMPNTRIM+ QP GGASGQAIDVEIQA+E+MHNKNN+ RIISGF
Sbjct: 160 STASIILGGGTKGKRFAMPNTRIMVHQPLGGASGQAIDVEIQAREIMHNKNNVVRIISGF 219

Query: 749 TGRSFEQVQKDIDRDRYLSPIEAVEYXXXXXXXXXXXXXPLMPVPERVEPALNYEE---- 916
           TGR+ EQV KDIDRDRY+SPIEAVEY             PL PVPERV+P L+YEE    
Sbjct: 220 TGRTVEQVLKDIDRDRYMSPIEAVEYGIIDGVIDGDSIIPLAPVPERVKPTLSYEEMRKD 279

Query: 917 -EKMLTPDIPDDEIY 958
             K LTPD+PDDEI+
Sbjct: 280 PMKFLTPDVPDDEIF 294