BLASTX nr result

ID: Glycyrrhiza23_contig00000219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000219
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3...   451   e-124
gb|ACU20374.1| unknown [Glycine max]                                  451   e-124
pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I gi|268...   451   e-124
ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3...   449   e-124
gb|ACU23907.1| unknown [Glycine max]                                  446   e-123

>ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
            [Glycine max]
          Length = 276

 Score =  451 bits (1160), Expect = e-124
 Identities = 221/252 (87%), Positives = 232/252 (92%)
 Frame = -2

Query: 1000 MAAQALVSSSSLTFSAEAAKQSFGARSHQSPIGFSRKGSFIVKAASTPPVKQGADRPLWF 821
            MAAQALVSSSSLTFSAEAA+QS G RS QSP GFSRK SF+VKAA+TPPVKQG+DRPLWF
Sbjct: 1    MAAQALVSSSSLTFSAEAARQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWF 60

Query: 820  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGAIAP 641
            ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE+INGR+AMLGAVGAIAP
Sbjct: 61   ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAP 120

Query: 640  EILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKP 461
            EILGKAGLIP+ETALPWF+TGV PPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKP
Sbjct: 121  EILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKP 180

Query: 460  GSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXGKDEKSMKDLKLKEVKNGRLAMLAIL 281
            GSMGKQYFLGLEKGLGGSG+PAY           GKDEKS+KDLKLKEVKNGRLAMLAIL
Sbjct: 181  GSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAIL 240

Query: 280  GYFIQGLVTGVG 245
            GYF+Q LVTGVG
Sbjct: 241  GYFVQALVTGVG 252


>gb|ACU20374.1| unknown [Glycine max]
          Length = 276

 Score =  451 bits (1160), Expect = e-124
 Identities = 221/252 (87%), Positives = 232/252 (92%)
 Frame = -2

Query: 1000 MAAQALVSSSSLTFSAEAAKQSFGARSHQSPIGFSRKGSFIVKAASTPPVKQGADRPLWF 821
            MAAQALVSSSSLTFSAEAA+QS G RS QSP GFSRK SF+VKAA+TPPVKQG+DRPLWF
Sbjct: 1    MAAQALVSSSSLTFSAEAARQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWF 60

Query: 820  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGAIAP 641
            ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE+INGR+AMLGAVGAIAP
Sbjct: 61   ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAP 120

Query: 640  EILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKP 461
            EILGKAGLIP+ETALPWF+TGV PPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKP
Sbjct: 121  EILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKP 180

Query: 460  GSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXGKDEKSMKDLKLKEVKNGRLAMLAIL 281
            GSMGKQYFLGLEKGLGGSG+PAY           GKDEKS+KDLKLKEVKNGRLAMLAIL
Sbjct: 181  GSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAIL 240

Query: 280  GYFIQGLVTGVG 245
            GYF+Q LVTGVG
Sbjct: 241  GYFVQALVTGVG 252


>pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
            gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant
            Photosystem I gi|268612196|pdb|2WSF|3 Chain 3, Improved
            Model Of Plant Photosystem I
          Length = 276

 Score =  451 bits (1159), Expect = e-124
 Identities = 221/252 (87%), Positives = 232/252 (92%)
 Frame = -2

Query: 1000 MAAQALVSSSSLTFSAEAAKQSFGARSHQSPIGFSRKGSFIVKAASTPPVKQGADRPLWF 821
            MAAQALVSSSSLTFSAEAA+QS G RS QSP GFSRK SF+VKAA+TPPVKQG+DRPLWF
Sbjct: 1    MAAQALVSSSSLTFSAEAARQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWF 60

Query: 820  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGAIAP 641
            ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE+INGR+AMLGAVGAIAP
Sbjct: 61   ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAP 120

Query: 640  EILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKP 461
            EILGKAGLIP+ETALPWF+TG IPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKP
Sbjct: 121  EILGKAGLIPQETALPWFRTGFIPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKP 180

Query: 460  GSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXGKDEKSMKDLKLKEVKNGRLAMLAIL 281
            GSMGKQYFLGLEKGLGGSG+PAY           GKDEKS+KDLKLKEVKNGRLAMLAIL
Sbjct: 181  GSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAIL 240

Query: 280  GYFIQGLVTGVG 245
            GYF+Q LVTGVG
Sbjct: 241  GYFVQALVTGVG 252


>ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
            isoform 1 [Glycine max] gi|356554090|ref|XP_003545382.1|
            PREDICTED: chlorophyll a-b binding protein 3,
            chloroplastic-like isoform 2 [Glycine max]
          Length = 276

 Score =  449 bits (1156), Expect = e-124
 Identities = 220/252 (87%), Positives = 231/252 (91%)
 Frame = -2

Query: 1000 MAAQALVSSSSLTFSAEAAKQSFGARSHQSPIGFSRKGSFIVKAASTPPVKQGADRPLWF 821
            MAAQALVSSSSLTFSAEA +QS G RS QSP GFSRK SF+VKAA+TPPVKQG+DRPLWF
Sbjct: 1    MAAQALVSSSSLTFSAEATRQSLGPRSLQSPFGFSRKASFLVKAAATPPVKQGSDRPLWF 60

Query: 820  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGAIAP 641
            ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE+INGR+AMLGAVGAIAP
Sbjct: 61   ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAP 120

Query: 640  EILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKP 461
            EILGKAGLIP+ETALPWF+TGV PPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKP
Sbjct: 121  EILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKP 180

Query: 460  GSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXGKDEKSMKDLKLKEVKNGRLAMLAIL 281
            GSMGKQYFLGLEKGLGGSG+PAY           GKDEKS+KDLKLKEVKNGRLAMLAIL
Sbjct: 181  GSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAIL 240

Query: 280  GYFIQGLVTGVG 245
            GYF+Q LVTGVG
Sbjct: 241  GYFVQALVTGVG 252


>gb|ACU23907.1| unknown [Glycine max]
          Length = 276

 Score =  446 bits (1146), Expect = e-123
 Identities = 218/252 (86%), Positives = 230/252 (91%)
 Frame = -2

Query: 1000 MAAQALVSSSSLTFSAEAAKQSFGARSHQSPIGFSRKGSFIVKAASTPPVKQGADRPLWF 821
            MAAQALVSSSSLTFSAEA +QS G RS QSP GFSRK SF+VKAA+ PPVKQG+DRPLWF
Sbjct: 1    MAAQALVSSSSLTFSAEATRQSLGPRSLQSPFGFSRKASFLVKAAAIPPVKQGSDRPLWF 60

Query: 820  ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGAIAP 641
            ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE+INGR+AMLGAVGAIAP
Sbjct: 61   ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAP 120

Query: 640  EILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKP 461
            EILGKAGLIP+ETALPWF+TGV PPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWAKP
Sbjct: 121  EILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKP 180

Query: 460  GSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXGKDEKSMKDLKLKEVKNGRLAMLAIL 281
            GSMGKQYFLGLEKGLGGSG+PAY           GKDEKS+KDLKLKEVKNGRLAMLAIL
Sbjct: 181  GSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAIL 240

Query: 280  GYFIQGLVTGVG 245
            GYF++ LVTGVG
Sbjct: 241  GYFVRALVTGVG 252


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