BLASTX nr result

ID: Glycyrrhiza23_contig00000216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000216
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617359.1| hypothetical protein MTR_5g090740 [Medicago ...   135   1e-29
ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250...   127   2e-27
ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-24
ref|XP_003561412.1| PREDICTED: uncharacterized protein LOC100835...   101   2e-19
ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363...    94   2e-17

>ref|XP_003617359.1| hypothetical protein MTR_5g090740 [Medicago truncatula]
           gi|355518694|gb|AET00318.1| hypothetical protein
           MTR_5g090740 [Medicago truncatula]
          Length = 190

 Score =  135 bits (340), Expect = 1e-29
 Identities = 86/196 (43%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
 Frame = -3

Query: 744 MGKIEGKVIIAMKGHPGSGKSTLAKCIASAXXXXXXXXXXXXDXXXXXXXXXXXXXXXXX 565
           M K++  VIIAMKGHPG+GKSTLAK IAS+            D                 
Sbjct: 1   MEKVKVGVIIAMKGHPGTGKSTLAKSIASSLKIPLIDKDDIKDCITTPLIQTTPPSLLNE 60

Query: 564 XXXXXXSYDAIWQVASTQLRLGLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXLIECRPSD 385
                  Y AI+Q+ASTQLR+GLS+                           +IECRP D
Sbjct: 61  LS-----YSAIFQIASTQLRVGLSLIIDSPLSRRSHLDRLRSLAGEYGARVVIIECRPGD 115

Query: 384 HALWXXXXXXXXXXG-HKPATWEELQKLLEGYGGCTEYDVGDDVPRMVVDTTAPVPLEEL 208
             LW          G HKPATWEEL+K++EGYGGC EYDVG  VP++V+DTT  V LE+L
Sbjct: 116 KGLWRRRVEERGGGGGHKPATWEELEKIVEGYGGCDEYDVG-GVPKLVMDTTEDVDLEKL 174

Query: 207 CSAALDFIFSHAAKPL 160
           CS AL+FI  HA K L
Sbjct: 175 CSHALEFIEDHAVKSL 190


>ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250574 [Vitis vinifera]
           gi|302143513|emb|CBI22074.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  127 bits (320), Expect = 2e-27
 Identities = 79/193 (40%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
 Frame = -3

Query: 732 EGKVIIAMKGHPGSGKSTLAKCIASAXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXX 553
           +G VIIAMKGHPGSGKSTLA+ IA              D                     
Sbjct: 10  QGPVIIAMKGHPGSGKSTLAQSIARVLRCPLIDKDDVRDSTSPLEPSTPDRLLNALS--- 66

Query: 552 XXSYDAIWQVASTQLRLGLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXLIECRPSDHALW 373
              YD IWQ+ASTQLRLGLSV                           ++ECRP DH+ W
Sbjct: 67  ---YDVIWQIASTQLRLGLSVVLDSPLSRRSHLDSLRRLAASSAASLLVVECRPRDHSEW 123

Query: 372 XXXXXXXXXXG------HKPATWEELQKLLEGYGGCTEYDVGDDVPRMVVDTTAPVPLEE 211
                            HKP+TW++L++LLE Y GCT Y+ G DVPRMVVDTTAPV L E
Sbjct: 124 RRRLERRGLGESDGSSWHKPSTWQDLERLLEEYDGCTNYEFG-DVPRMVVDTTAPVGLGE 182

Query: 210 LCSAALDFIFSHA 172
           + +A ++FI +HA
Sbjct: 183 MVAAVVEFIAAHA 195


>ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|222842588|gb|EEE80135.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  118 bits (295), Expect = 2e-24
 Identities = 71/188 (37%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
 Frame = -3

Query: 723 VIIAMKGHPGSGKSTLAKCIASAXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXS 544
           VIIAMKGHPG+GKSTLA  +AS+            D                        
Sbjct: 13  VIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKVLLNDLS-- 70

Query: 543 YDAIWQVASTQLRLGLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXLIECRPSDHALWXXX 364
           YD +WQ+ASTQLRLGLSV                           ++EC+P D  +W   
Sbjct: 71  YDVVWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRR 130

Query: 363 XXXXXXXG----HKPATWEELQKLLEGYGGCTEYDVGDDVPRMVVDTTAPVPLEELCSAA 196
                       HKP+TW++L++LLEGYGG T+YDVG DVP++V+DT+  V ++EL S  
Sbjct: 131 LEQRGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVG-DVPKIVLDTSVAVAVDELVSRV 189

Query: 195 LDFIFSHA 172
           +DF+ S A
Sbjct: 190 VDFVVSSA 197


>ref|XP_003561412.1| PREDICTED: uncharacterized protein LOC100835907 [Brachypodium
           distachyon]
          Length = 202

 Score =  101 bits (251), Expect = 2e-19
 Identities = 73/206 (35%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
 Frame = -3

Query: 762 GEERGEMGKIEGKVIIAMKGHPGSGKSTLAKCIASAXXXXXXXXXXXXDXXXXXXXXXXX 583
           GEE+        +V++AMKGHPGSGKST A  IA+A            D           
Sbjct: 3   GEEQSGPPAAVERVVVAMKGHPGSGKSTAAHAIAAALRCPLLDKDDVRDCTLRLERAAAG 62

Query: 582 XXXXXXXXXXXXSYDAIWQVASTQLRLGLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXLI 403
                        Y  +W+VA  QLRLGLSV                            +
Sbjct: 63  DSGMLNELS----YAVLWRVAEKQLRLGLSVVVDSPLSRRAHLDELARLPAALVVV---V 115

Query: 402 ECRPSDHALWXXXXXXXXXXG------HKPATWEELQKLLEGYGGCTEYDVGDDVPRMVV 241
           ECRP D   W                 HKP TW+EL++L+EGY GCT+YD+G DVPR+VV
Sbjct: 116 ECRPGDEDEWRRRLEERGDLLADGDGWHKPKTWDELERLVEGYRGCTDYDIG-DVPRIVV 174

Query: 240 DTTAP-VPLEELCSAALDFIFSHAAK 166
           DTT P V  E + +   DFI S  A+
Sbjct: 175 DTTDPMVGAEAIAARVEDFIRSLLAR 200


>ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363|gb|ACN25265.1| unknown
           [Zea mays] gi|414883595|tpg|DAA59609.1| TPA:
           hypothetical protein ZEAMMB73_694502 [Zea mays]
          Length = 211

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 67/195 (34%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
 Frame = -3

Query: 723 VIIAMKGHPGSGKSTLAKCIASAXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXS 544
           V++AMKGHPGSGKST A+ IA+A            D                        
Sbjct: 12  VVVAMKGHPGSGKSTAARAIATALCCPLLDKDDVRDCMLPLEGLAAAGMLNDLS------ 65

Query: 543 YDAIWQVASTQLRLGLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXLIECRPSDHALWXXX 364
           Y  +W++A  Q+RLGLSV                            +ECRP D+  W   
Sbjct: 66  YAVLWRMAERQVRLGLSVVIDSPLSRRSHLDMLTRLAGVLVVV---VECRPGDNEEWRRR 122

Query: 363 XXXXXXXG---------HKPATWEELQKLLEGYGGCTEYDVGDDVPRMVVDTTAP-VPLE 214
                            HKP TW EL++LLEGY GCT+Y++G DVPR+VVDTT P V  +
Sbjct: 123 LESRGSAVANGGGGDGWHKPKTWAELERLLEGYQGCTDYEIG-DVPRIVVDTTDPTVDAQ 181

Query: 213 ELCSAALDFIFSHAA 169
                 + FI SH A
Sbjct: 182 VAAEKVVVFIRSHLA 196


Top