BLASTX nr result

ID: Glycyrrhiza23_contig00000203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000203
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48929.1| unknown [Medicago truncatula]                          366   7e-99
gb|AFK35360.1| unknown [Lotus japonicus]                              365   2e-98
sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15, ch...   364   3e-98
pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 5...   357   3e-96
ref|NP_001235059.1| uncharacterized protein LOC100306183 [Glycin...   357   4e-96

>gb|AFK48929.1| unknown [Medicago truncatula]
          Length = 257

 Score =  366 bits (940), Expect = 7e-99
 Identities = 190/252 (75%), Positives = 210/252 (83%), Gaps = 3/252 (1%)
 Frame = +2

Query: 56  MGAASLIIPVSSWLPSLASPFKGTVKTLEAAR---PCVKIQRTRGRVFVVNKXXXXXXXX 226
           M AA+ +IPVS WLPSLASPFKG VKTL A     PC+KIQRT+ RV V+NK        
Sbjct: 1   MSAAASLIPVS-WLPSLASPFKGNVKTLVAKPYLCPCLKIQRTKHRVSVINKSVSASVQP 59

Query: 227 XXXEGGESVRFRLDNLGPQPGSXXXXXXXXXXISAGQGASCGFGMRGQKSRSGPGVMKGF 406
                GE+VRFRLDNLGPQPGS          I+AGQGASCGFGMRGQKSRSGPG+M+GF
Sbjct: 60  ----AGENVRFRLDNLGPQPGSRKRAKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGF 115

Query: 407 EGGQMPLYRRIPKLRGIAGGMHAGLPKYIHVNLEDIENARFQEGEEVSLETLKAKGVINP 586
           EGGQMPLYRR+PKLRGIAGGMHAGLPKY+H+NL+DIENA FQEGEEVSLETL  K VINP
Sbjct: 116 EGGQMPLYRRLPKLRGIAGGMHAGLPKYVHINLKDIENAGFQEGEEVSLETLTEKRVINP 175

Query: 587 SGRERRLPLKVLGDGELSKKLTIKARAFSTSAKEKLESAGCTLTVLPGRKKWVKPSVAKN 766
           SGRER+L LKVLG+GEL KKLTIKA AFSTSAKEKLESAGC++TV+PGRKKWVKPSVAKN
Sbjct: 176 SGRERKLLLKVLGEGELGKKLTIKAGAFSTSAKEKLESAGCSITVIPGRKKWVKPSVAKN 235

Query: 767 LARAEEHFAKKR 802
           LARA+E+FAKKR
Sbjct: 236 LARADEYFAKKR 247


>gb|AFK35360.1| unknown [Lotus japonicus]
          Length = 256

 Score =  365 bits (936), Expect = 2e-98
 Identities = 188/244 (77%), Positives = 205/244 (84%), Gaps = 1/244 (0%)
 Frame = +2

Query: 74  IIPVSSWLPS-LASPFKGTVKTLEAARPCVKIQRTRGRVFVVNKXXXXXXXXXXXEGGES 250
           ++PVSSWLP  L SPFKGT+KTLEA RPC+KIQR R RVFVV              G   
Sbjct: 6   LLPVSSWLPPPLPSPFKGTLKTLEA-RPCLKIQRPRPRVFVVTSAAAPVSVSAPNVG--- 61

Query: 251 VRFRLDNLGPQPGSXXXXXXXXXXISAGQGASCGFGMRGQKSRSGPGVMKGFEGGQMPLY 430
           VRFRLDNLGPQPGS          ISAGQGASCGFGMRGQKSRSGPGV +GFEGGQMPLY
Sbjct: 62  VRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLY 121

Query: 431 RRIPKLRGIAGGMHAGLPKYIHVNLEDIENARFQEGEEVSLETLKAKGVINPSGRERRLP 610
           RRIPKLRGIAGGM AGLPKY+HVNL DIE A+FQ+G+EVSLE+LK KGVINPSGRERRLP
Sbjct: 122 RRIPKLRGIAGGMSAGLPKYVHVNLRDIEGAKFQDGDEVSLESLKEKGVINPSGRERRLP 181

Query: 611 LKVLGDGELSKKLTIKARAFSTSAKEKLESAGCTLTVLPGRKKWVKPSVAKNLARAEEHF 790
           LK+LG+GELSKKLT+KARAFSTSAKEKLES GC+LTVLPGRKKWVKPSVAKN+ARA+E+F
Sbjct: 182 LKILGEGELSKKLTVKARAFSTSAKEKLESIGCSLTVLPGRKKWVKPSVAKNIARADEYF 241

Query: 791 AKKR 802
           AKKR
Sbjct: 242 AKKR 245


>sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15, chloroplastic; AltName:
           Full=CL15; Flags: Precursor gi|20867|emb|CAA77595.1|
           Plastid ribosomal protein CL15 [Pisum sativum]
          Length = 258

 Score =  364 bits (934), Expect = 3e-98
 Identities = 196/252 (77%), Positives = 210/252 (83%), Gaps = 3/252 (1%)
 Frame = +2

Query: 56  MGAASLIIPVSSWLPSLASPFKGTVKTLEAAR---PCVKIQRTRGRVFVVNKXXXXXXXX 226
           M AASLI PVSS LPSLASPFKG VKTL A     PC+KIQRT+ RV VVNK        
Sbjct: 1   MSAASLI-PVSS-LPSLASPFKGNVKTLVAKPCLCPCLKIQRTKLRVSVVNKAASAYNVK 58

Query: 227 XXXEGGESVRFRLDNLGPQPGSXXXXXXXXXXISAGQGASCGFGMRGQKSRSGPGVMKGF 406
                GE+VRFRLDNLGPQPGS          I+AGQGASCGFGMRGQKSRSGPG+M+GF
Sbjct: 59  ---SSGENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGF 115

Query: 407 EGGQMPLYRRIPKLRGIAGGMHAGLPKYIHVNLEDIENARFQEGEEVSLETLKAKGVINP 586
           EGGQMPLYRR+PKLRGIAGGMHAGLPKY++VNL DIENA FQ+GEEVSLETLKAK VINP
Sbjct: 116 EGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINP 175

Query: 587 SGRERRLPLKVLGDGELSKKLTIKARAFSTSAKEKLESAGCTLTVLPGRKKWVKPSVAKN 766
           SGRER+LPLK+L DGELSKKLTIKA AFSTSAKEKLE AGC+L VLPGRKKWVKPSVAKN
Sbjct: 176 SGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKN 235

Query: 767 LARAEEHFAKKR 802
           LARAEE+FAKKR
Sbjct: 236 LARAEEYFAKKR 247


>pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 257

 Score =  357 bits (917), Expect = 3e-96
 Identities = 195/252 (77%), Positives = 209/252 (82%), Gaps = 3/252 (1%)
 Frame = +2

Query: 56  MGAASLIIPVSSWLPSLASPFKGTVKTLEAAR---PCVKIQRTRGRVFVVNKXXXXXXXX 226
           M AASLI PVSS LPSLASPFKG VKTL A     PC+KIQRT+ RV VVNK        
Sbjct: 1   MSAASLI-PVSS-LPSLASPFKGNVKTLVAKPCLCPCLKIQRTKLRVSVVNKAASAYNVK 58

Query: 227 XXXEGGESVRFRLDNLGPQPGSXXXXXXXXXXISAGQGASCGFGMRGQKSRSGPGVMKGF 406
                GE+V FRLDNLGPQPGS          I+AGQGASCGFGMRGQKSRSGPG+M+GF
Sbjct: 59  ---SSGENV-FRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGF 114

Query: 407 EGGQMPLYRRIPKLRGIAGGMHAGLPKYIHVNLEDIENARFQEGEEVSLETLKAKGVINP 586
           EGGQMPLYRR+PKLRGIAGGMHAGLPKY++VNL DIENA FQ+GEEVSLETLKAK VINP
Sbjct: 115 EGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINP 174

Query: 587 SGRERRLPLKVLGDGELSKKLTIKARAFSTSAKEKLESAGCTLTVLPGRKKWVKPSVAKN 766
           SGRER+LPLK+L DGELSKKLTIKA AFSTSAKEKLE AGC+L VLPGRKKWVKPSVAKN
Sbjct: 175 SGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKN 234

Query: 767 LARAEEHFAKKR 802
           LARAEE+FAKKR
Sbjct: 235 LARAEEYFAKKR 246


>ref|NP_001235059.1| uncharacterized protein LOC100306183 [Glycine max]
           gi|255627797|gb|ACU14243.1| unknown [Glycine max]
          Length = 256

 Score =  357 bits (916), Expect = 4e-96
 Identities = 192/250 (76%), Positives = 207/250 (82%), Gaps = 1/250 (0%)
 Frame = +2

Query: 56  MGAASLIIPVSSWLP-SLASPFKGTVKTLEAARPCVKIQRTRGRVFVVNKXXXXXXXXXX 232
           MG+ASLI PVS WLP    SPFKGTVKTL A     KIQ+ R  + VVNK          
Sbjct: 1   MGSASLI-PVS-WLPWRPLSPFKGTVKTLVAKPWLKKIQQARPLISVVNKAASLSSPVTA 58

Query: 233 XEGGESVRFRLDNLGPQPGSXXXXXXXXXXISAGQGASCGFGMRGQKSRSGPGVMKGFEG 412
              G  VRFRLDNLGPQPGS          ISAGQGASCGFGMRGQKSRSGPGV KGFEG
Sbjct: 59  PSVG--VRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEG 116

Query: 413 GQMPLYRRIPKLRGIAGGMHAGLPKYIHVNLEDIENARFQEGEEVSLETLKAKGVINPSG 592
           GQMPLYRRIPKLRGIAGGMHAGLPKY+HVNL DIE+A+F+EGEEVSLE+LKAKGVINPSG
Sbjct: 117 GQMPLYRRIPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSG 176

Query: 593 RERRLPLKVLGDGELSKKLTIKARAFSTSAKEKLESAGCTLTVLPGRKKWVKPSVAKNLA 772
           RERRLPLK+LG+GELSKKLT+KARAFSTSAKEKLE+AGC+LTVLPGRKKWVKPSVAKNLA
Sbjct: 177 RERRLPLKILGEGELSKKLTLKARAFSTSAKEKLENAGCSLTVLPGRKKWVKPSVAKNLA 236

Query: 773 RAEEHFAKKR 802
           RA+E+FAKKR
Sbjct: 237 RADEYFAKKR 246


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