BLASTX nr result

ID: Glycyrrhiza23_contig00000183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000183
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616767.1| Protein transport protein SEC61 gamma subuni...   110   2e-23
ref|XP_003519405.1| PREDICTED: protein transport protein Sec61 s...   110   2e-22
gb|AFK38541.1| unknown [Medicago truncatula]                          110   2e-22
ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 s...   109   4e-22
ref|XP_004145153.1| PREDICTED: protein transport protein Sec61 s...   107   2e-21

>ref|XP_003616767.1| Protein transport protein SEC61 gamma subunit [Medicago truncatula]
           gi|355518102|gb|AES99725.1| Protein transport protein
           SEC61 gamma subunit [Medicago truncatula]
          Length = 112

 Score =  110 bits (275), Expect(2) = 2e-23
 Identities = 57/69 (82%), Positives = 57/69 (82%)
 Frame = +1

Query: 121 MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIXXXXXXXXXXXXKLIFIP 300
           MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAI            KLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 301 INNIIVGSG 327
           INNIIVGSG
Sbjct: 61  INNIIVGSG 69



 Score = 23.9 bits (50), Expect(2) = 2e-23
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 351 SGIQVVEQKEAERVPASVDRSVHF 422
           SGI VV+QKEAE +  S    + F
Sbjct: 75  SGIHVVKQKEAEELNLSYVFQIFF 98


>ref|XP_003519405.1| PREDICTED: protein transport protein Sec61 subunit gamma-like
           [Glycine max] gi|356543409|ref|XP_003540153.1|
           PREDICTED: protein transport protein Sec61 subunit
           gamma-like [Glycine max]
           gi|356554605|ref|XP_003545635.1| PREDICTED: protein
           transport protein Sec61 subunit gamma [Glycine max]
           gi|357479489|ref|XP_003610030.1| Protein transport
           protein SEC61 gamma subunit [Medicago truncatula]
           gi|357492959|ref|XP_003616768.1| Protein transport
           protein SEC61 gamma subunit [Medicago truncatula]
           gi|355511085|gb|AES92227.1| Protein transport protein
           SEC61 gamma subunit [Medicago truncatula]
           gi|355518103|gb|AES99726.1| Protein transport protein
           SEC61 gamma subunit [Medicago truncatula]
          Length = 69

 Score =  110 bits (275), Expect = 2e-22
 Identities = 57/69 (82%), Positives = 57/69 (82%)
 Frame = +1

Query: 121 MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIXXXXXXXXXXXXKLIFIP 300
           MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAI            KLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 301 INNIIVGSG 327
           INNIIVGSG
Sbjct: 61  INNIIVGSG 69


>gb|AFK38541.1| unknown [Medicago truncatula]
          Length = 69

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/69 (81%), Positives = 57/69 (82%)
 Frame = +1

Query: 121 MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIXXXXXXXXXXXXKLIFIP 300
           MDAIDSVFDPLREFAKDSVRL+KRCHKPDRKEFSKVAVRTAI            KLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLIKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 301 INNIIVGSG 327
           INNIIVGSG
Sbjct: 61  INNIIVGSG 69


>ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 subunit gamma-like
           isoform 1 [Cucumis sativus]
           gi|449455854|ref|XP_004145665.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus] gi|449502009|ref|XP_004161518.1|
           PREDICTED: protein transport protein Sec61 subunit
           gamma-like isoform 1 [Cucumis sativus]
           gi|449502012|ref|XP_004161519.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus]
          Length = 69

 Score =  109 bits (272), Expect = 4e-22
 Identities = 56/69 (81%), Positives = 57/69 (82%)
 Frame = +1

Query: 121 MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIXXXXXXXXXXXXKLIFIP 300
           MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAI            KLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 301 INNIIVGSG 327
           INNIIVGSG
Sbjct: 61  INNIIVGSG 69


>ref|XP_004145153.1| PREDICTED: protein transport protein Sec61 subunit gamma-like
           [Cucumis sativus] gi|449474264|ref|XP_004154122.1|
           PREDICTED: protein transport protein Sec61 subunit
           gamma-like [Cucumis sativus]
           gi|449503678|ref|XP_004162122.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like [Cucumis
           sativus]
          Length = 75

 Score =  107 bits (267), Expect = 2e-21
 Identities = 55/72 (76%), Positives = 58/72 (80%)
 Frame = +1

Query: 121 MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIXXXXXXXXXXXXKLIFIP 300
           MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAI            KLIFIP
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 301 INNIIVGSG*DE 336
           INNIIVGSG D+
Sbjct: 61  INNIIVGSGNDK 72


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