BLASTX nr result

ID: Glycyrrhiza23_contig00000132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000132
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachi...   128   2e-27
gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat...   127   3e-27
ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide...   127   5e-27
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin...   125   1e-26
ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago ...   125   2e-26

>gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
          Length = 129

 Score =  128 bits (321), Expect = 2e-27
 Identities = 61/76 (80%), Positives = 61/76 (80%)
 Frame = +2

Query: 332 NLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWAV 511
           NL  GLDASGRK KGKGVYQFVDKYGANVDGYSPIYD KDWSPTGDVYTGGTTGLAIWAV
Sbjct: 49  NLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAV 108

Query: 512 TXXXXXXXXXXXVYNT 559
           T           VYNT
Sbjct: 109 TLVGLLAGGALLVYNT 124


>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
          Length = 136

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/76 (78%), Positives = 62/76 (81%)
 Frame = +2

Query: 332 NLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWAV 511
           +LP GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWSPTGDVYTGGTTGLAIWAV
Sbjct: 56  DLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAV 115

Query: 512 TXXXXXXXXXXXVYNT 559
           T           VYNT
Sbjct: 116 TLAGLLAGGALLVYNT 131


>ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
           isoform 1 [Cucumis sativus]
           gi|449460038|ref|XP_004147753.1| PREDICTED: photosystem
           II 10 kDa polypeptide, chloroplastic-like isoform 2
           [Cucumis sativus] gi|449502146|ref|XP_004161556.1|
           PREDICTED: photosystem II 10 kDa polypeptide,
           chloroplastic-like isoform 1 [Cucumis sativus]
           gi|449502150|ref|XP_004161557.1| PREDICTED: photosystem
           II 10 kDa polypeptide, chloroplastic-like isoform 2
           [Cucumis sativus]
          Length = 138

 Score =  127 bits (318), Expect = 5e-27
 Identities = 60/76 (78%), Positives = 60/76 (78%)
 Frame = +2

Query: 332 NLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWAV 511
           NL  GLDASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVY GGTTGLAIWA 
Sbjct: 58  NLRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYVGGTTGLAIWAA 117

Query: 512 TXXXXXXXXXXXVYNT 559
           T           VYNT
Sbjct: 118 TLAGLLAGGALLVYNT 133


>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
           gi|255626243|gb|ACU13466.1| unknown [Glycine max]
          Length = 139

 Score =  125 bits (315), Expect = 1e-26
 Identities = 59/75 (78%), Positives = 61/75 (81%)
 Frame = +2

Query: 335 LPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWAVT 514
           L +G+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVY GGTTGLAIWAVT
Sbjct: 60  LREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119

Query: 515 XXXXXXXXXXXVYNT 559
                      VYNT
Sbjct: 120 LLGLLAGGALLVYNT 134


>ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
           gi|355485029|gb|AES66232.1| Photosystem II 10 kDa
           polypeptide [Medicago truncatula]
           gi|388509646|gb|AFK42889.1| unknown [Medicago
           truncatula]
          Length = 136

 Score =  125 bits (313), Expect = 2e-26
 Identities = 59/75 (78%), Positives = 60/75 (80%)
 Frame = +2

Query: 335 LPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWAVT 514
           LP G DASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWSPTGDVYTGGTTGLAIWAVT
Sbjct: 57  LPDGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVT 116

Query: 515 XXXXXXXXXXXVYNT 559
                      VYNT
Sbjct: 117 LAGLLAGGALLVYNT 131


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