BLASTX nr result

ID: Glycyrrhiza23_contig00000125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000125
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48113.1| unknown [Medicago truncatula]                           70   2e-10
emb|CBI39675.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_003626135.1| Hydrophobic protein LTI6B [Medicago truncatu...    59   4e-07
gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr...    58   9e-07
ref|XP_002884539.1| low temperature and salt responsive protein ...    57   1e-06

>gb|AFK48113.1| unknown [Medicago truncatula]
          Length = 59

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -3

Query: 513 STWCLPQVWLPRGVLDLFGAHPFWVYSWNHLCYLCHHQVI*LPLIN 376
           S+ CLPQVWLP GVL LFG +PFW+  WN LCYLC++QVI L  ++
Sbjct: 12  SSRCLPQVWLPCGVLALFGTNPFWLSPWNSLCYLCYYQVINLAFVD 57


>emb|CBI39675.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = -3

Query: 507 WCLPQVWLPRGVLDLFGAHPFWVYSWNHLCYLCHHQVI 394
           WCLPQVW+P GVLDLFGA  F + SWN LC LCHHQVI
Sbjct: 60  WCLPQVWMPGGVLDLFGADFFRLPSWNCLCCLCHHQVI 97


>ref|XP_003626135.1| Hydrophobic protein LTI6B [Medicago truncatula]
           gi|355501150|gb|AES82353.1| Hydrophobic protein LTI6B
           [Medicago truncatula]
          Length = 83

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/56 (53%), Positives = 33/56 (58%)
 Frame = -1

Query: 515 PPLGVFLKFGCHVEFWICLVLTLFXXXXXXXXXXXXITK*SNCP*LISLLWIMNSC 348
           PPLGVFLKFGCHVEFW+CLVLTLF            ITK           WI++SC
Sbjct: 16  PPLGVFLKFGCHVEFWLCLVLTLFGYLPGILYAIYAITK-----------WIIHSC 60


>gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis
           thaliana]
          Length = 67

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = -1

Query: 515 PPLGVFLKFGCHVEFWICLVLTLFXXXXXXXXXXXXITK*SNCP*LISLLW 363
           PPLGVFLKFGC VEFWICL+LTLF            ITK ++C  ++  LW
Sbjct: 16  PPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKKNSCFVVLFSLW 66


>ref|XP_002884539.1| low temperature and salt responsive protein LTI6B [Arabidopsis
           lyrata subsp. lyrata] gi|297330379|gb|EFH60798.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 32/51 (62%)
 Frame = -1

Query: 515 PPLGVFLKFGCHVEFWICLVLTLFXXXXXXXXXXXXITK*SNCP*LISLLW 363
           PPLGVFLKFGC VEFWICL+LTLF            ITK + C  ++  LW
Sbjct: 16  PPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITKRNRCFVVLFSLW 66


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