BLASTX nr result
ID: Glycyrrhiza23_contig00000124
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00000124
(1710 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001242531.1| ribulose bisphosphate carboxylase/oxygenase ... 802 0.0
ref|NP_001240152.1| ribulose bisphosphate carboxylase/oxygenase ... 798 0.0
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase... 793 0.0
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera] 793 0.0
ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygen... 783 0.0
>ref|NP_001242531.1| ribulose bisphosphate carboxylase/oxygenase activase 1,
chloroplastic-like [Glycine max]
gi|290766483|gb|ADD60244.1| rubisco activase [Glycine
max]
Length = 478
Score = 802 bits (2071), Expect(2) = 0.0
Identities = 396/439 (90%), Positives = 417/439 (94%), Gaps = 3/439 (0%)
Frame = +1
Query: 175 MAASVSTVGAV-KTPLSLNGSGAGTSVPSSAFFGTSLKKVTSSRLPNAKVSSGSFKIVAA 351
MAASVST+GAV + PLSLN S AG SVPSSAFFGTSLKKVT+SR+PN K+SSGSFKIVAA
Sbjct: 1 MAASVSTIGAVNRAPLSLNSSEAGDSVPSSAFFGTSLKKVTASRVPNVKISSGSFKIVAA 60
Query: 352 E--IDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYIS 525
E IDE +QT KDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQ+ GTHYAVMSS+EY+S
Sbjct: 61 EKEIDEQQQTNKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQETGTHYAVMSSFEYLS 120
Query: 526 TGLREYNLDNTMDGLYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 705
TGL++YNLDN MDG YIAPAFMDKLV HI+KNFMTLPNIKVPLILGIWGGKGQGKSFQCE
Sbjct: 121 TGLKQYNLDNNMDGFYIAPAFMDKLVAHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 180
Query: 706 LVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR 885
LVFAKMGI PIMM AGELESGNAGEPAKLIRQRYREAADII KGKMCCLFINDLD GAGR
Sbjct: 181 LVFAKMGINPIMMGAGELESGNAGEPAKLIRQRYREAADIISKGKMCCLFINDLDVGAGR 240
Query: 886 MGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR 1065
+GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNK+ENPRVPIIVTGNDFSTLYAPLIR
Sbjct: 241 LGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIR 300
Query: 1066 DGRMEKFYWAPTRDDRVGVCKGIFRSDNVPDDDIVTLVDTFPGQSIDFFGALRARVYDDE 1245
DGRMEKFYWAPTRDDRVGVCKGIFR+DNVP+D+IV LVDTFPGQSIDFFGALRARVYDDE
Sbjct: 301 DGRMEKFYWAPTRDDRVGVCKGIFRTDNVPEDEIVKLVDTFPGQSIDFFGALRARVYDDE 360
Query: 1246 VRKWISGVGVDSVGKKLVNSKEGPPTFEQPKMTLDKLLEYGNMLVQEQENVKRVQLADKY 1425
VRKWISGVGVD +GKKLVNSKEGPPTF+QPKMTL KLLEYGNMLVQEQENVKRVQLADKY
Sbjct: 361 VRKWISGVGVDLIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKY 420
Query: 1426 LSEAALGDANEDAIKRGAF 1482
L+EAALGDAN+DAIKRG F
Sbjct: 421 LNEAALGDANQDAIKRGTF 439
Score = 50.8 bits (120), Expect(2) = 0.0
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 1539 VPEGCIDPNASNFDPTTRSCDGTCV 1613
VPEGC DPNASNFDPT RS DGTC+
Sbjct: 451 VPEGCTDPNASNFDPTARSDDGTCL 475
>ref|NP_001240152.1| ribulose bisphosphate carboxylase/oxygenase activase 1,
chloroplastic-like [Glycine max]
gi|290766479|gb|ADD60242.1| alpha-form rubisco activase
[Glycine max] gi|290766489|gb|ADD60247.1| alpha-form
rubisco activase [Glycine max]
Length = 478
Score = 798 bits (2060), Expect(2) = 0.0
Identities = 396/439 (90%), Positives = 414/439 (94%), Gaps = 3/439 (0%)
Frame = +1
Query: 175 MAASVSTVGAVK-TPLSLNGSGAGTSVPSSAFFGTSLKKVTSSRLPNAKVSSGSFKIVAA 351
MAASVSTVGAV PLSLN SGAG SVPSSAFFGTSLKKV +SR+PN K+SSGSFKIVAA
Sbjct: 1 MAASVSTVGAVNGAPLSLNSSGAGASVPSSAFFGTSLKKVIASRVPNVKISSGSFKIVAA 60
Query: 352 E--IDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYIS 525
E IDE +QT+KDRWKGLAYD+SDDQQDITRGKG+VDSLFQAPQ GTHYA+MSSYEY+S
Sbjct: 61 EKEIDEKQQTDKDRWKGLAYDVSDDQQDITRGKGLVDSLFQAPQDTGTHYAIMSSYEYLS 120
Query: 526 TGLREYNLDNTMDGLYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 705
TGL++YNLDN MDG YIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCE
Sbjct: 121 TGLKQYNLDNNMDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 180
Query: 706 LVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR 885
LVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMC LFINDLDAGAGR
Sbjct: 181 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGR 240
Query: 886 MGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR 1065
+GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR
Sbjct: 241 LGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIR 300
Query: 1066 DGRMEKFYWAPTRDDRVGVCKGIFRSDNVPDDDIVTLVDTFPGQSIDFFGALRARVYDDE 1245
DGRMEKFYWAPTRDDRVGVC GIFR+DNVP DDIV LVDTFPGQSIDFFGALRARVYDDE
Sbjct: 301 DGRMEKFYWAPTRDDRVGVCNGIFRTDNVPKDDIVKLVDTFPGQSIDFFGALRARVYDDE 360
Query: 1246 VRKWISGVGVDSVGKKLVNSKEGPPTFEQPKMTLDKLLEYGNMLVQEQENVKRVQLADKY 1425
VRKWIS VGVD +GKKLVNSKEGPPTF+QPKMTL KLLEYGNMLVQEQENVKRVQLADKY
Sbjct: 361 VRKWISVVGVDFIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKY 420
Query: 1426 LSEAALGDANEDAIKRGAF 1482
L EAALGDAN+D+I RG F
Sbjct: 421 LKEAALGDANQDSINRGTF 439
Score = 50.8 bits (120), Expect(2) = 0.0
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 1539 VPEGCIDPNASNFDPTTRSCDGTCV 1613
VPEGC DPNASNFDPT RS DGTC+
Sbjct: 451 VPEGCTDPNASNFDPTARSDDGTCL 475
>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
chloroplastic isoform 1 [Vitis vinifera]
gi|297746032|emb|CBI16088.3| unnamed protein product
[Vitis vinifera]
Length = 472
Score = 793 bits (2048), Expect(2) = 0.0
Identities = 391/437 (89%), Positives = 417/437 (95%), Gaps = 1/437 (0%)
Frame = +1
Query: 175 MAASVSTVGAV-KTPLSLNGSGAGTSVPSSAFFGTSLKKVTSSRLPNAKVSSGSFKIVAA 351
MA +VST+GAV +TPLSLN SG G SVPSSAFFG+SLKKV SSR + K++SGSFK+VA
Sbjct: 1 MATTVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKV-SSRFTHPKIASGSFKVVA- 58
Query: 352 EIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYISTG 531
EIDE++QTEKDRWKGLAYD+SDDQQDITRGKGMVDSLFQAP Q+GTHYAVMSSYEY+STG
Sbjct: 59 EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTG 118
Query: 532 LREYNLDNTMDGLYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELV 711
LR+YNLDN MDG YIAPAFMDKLVVHI+KNFMTLPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELV 178
Query: 712 FAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMG 891
F+KMGI PIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCLFINDLDAGAGR+G
Sbjct: 179 FSKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLG 238
Query: 892 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 1071
GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 298
Query: 1072 RMEKFYWAPTRDDRVGVCKGIFRSDNVPDDDIVTLVDTFPGQSIDFFGALRARVYDDEVR 1251
RMEKFYWAP R+DR+GVCKGIFRSDNVPDDDIV +VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVR 358
Query: 1252 KWISGVGVDSVGKKLVNSKEGPPTFEQPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLS 1431
KWISGVGVD +GKKLVNSKEGPPTFEQPKMT++KLLEYGNMLV EQENVKRVQLADKYLS
Sbjct: 359 KWISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLS 418
Query: 1432 EAALGDANEDAIKRGAF 1482
EAALGDAN D+I+RG F
Sbjct: 419 EAALGDANVDSIERGTF 435
Score = 43.9 bits (102), Expect(2) = 0.0
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 1539 VPEGCIDPNASNFDPTTRSCDGTC 1610
VPEGC DP+A+NFDPT RS +G+C
Sbjct: 447 VPEGCTDPSAANFDPTARSDNGSC 470
>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
Length = 472
Score = 793 bits (2047), Expect(2) = 0.0
Identities = 391/437 (89%), Positives = 417/437 (95%), Gaps = 1/437 (0%)
Frame = +1
Query: 175 MAASVSTVGAV-KTPLSLNGSGAGTSVPSSAFFGTSLKKVTSSRLPNAKVSSGSFKIVAA 351
MA +VST+GAV +TPLSLN SG G SVPSSAFFG+SLKKV SSR + K++SGSFK+VA
Sbjct: 1 MATTVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKV-SSRFTHPKIASGSFKVVA- 58
Query: 352 EIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYISTG 531
EIDE++QTEKDRWKGLAYD+SDDQQDITRGKGMVDSLFQAP Q+GTHYAVMSSYEY+STG
Sbjct: 59 EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTG 118
Query: 532 LREYNLDNTMDGLYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELV 711
LR+YNLDN MDG YIAPAFMDKLVVHI+KNFMTLPNIKVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELV 178
Query: 712 FAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMG 891
F+KMGI PIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCLFINDLDAGAGR+G
Sbjct: 179 FSKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLG 238
Query: 892 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 1071
GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 298
Query: 1072 RMEKFYWAPTRDDRVGVCKGIFRSDNVPDDDIVTLVDTFPGQSIDFFGALRARVYDDEVR 1251
RMEKFYWAP R+DR+GVCKGIFRSDNVPDDDIV +VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVR 358
Query: 1252 KWISGVGVDSVGKKLVNSKEGPPTFEQPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLS 1431
KWISGVGVD +GKKLVNSKEGPPTFEQPKMT++KLLEYGNMLV EQENVKRVQLADKYLS
Sbjct: 359 KWISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLS 418
Query: 1432 EAALGDANEDAIKRGAF 1482
EAALGDAN D+I+RG F
Sbjct: 419 EAALGDANVDSIERGTF 435
Score = 43.9 bits (102), Expect(2) = 0.0
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 1539 VPEGCIDPNASNFDPTTRSCDGTC 1610
VPEGC DP+A+NFDPT RS +G+C
Sbjct: 447 VPEGCTDPSAANFDPTARSDNGSC 470
>ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygenase activase [Medicago
truncatula] gi|355517785|gb|AES99408.1| Ribulose-1
5-bisphosphate carboxylase/oxygenase activase [Medicago
truncatula]
Length = 476
Score = 783 bits (2021), Expect(2) = 0.0
Identities = 386/437 (88%), Positives = 414/437 (94%), Gaps = 1/437 (0%)
Frame = +1
Query: 175 MAASVSTVGAVK-TPLSLNGSGAGTSVPSSAFFGTSLKKVTSSRLPNAKVSSGSFKIVAA 351
M ASVS V AV TPLSLN SGA SVPSS+FFGTSLKKVTS RLPN KVSSG FKIVAA
Sbjct: 1 MVASVSAVRAVSGTPLSLNSSGAVASVPSSSFFGTSLKKVTS-RLPNTKVSSGRFKIVAA 59
Query: 352 EIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHYAVMSSYEYISTG 531
EI+E KQT+KDRW+GLAYD SDDQQDITRGKGMVD++FQAPQ +GTHYAVMSSYEYISTG
Sbjct: 60 EINESKQTDKDRWRGLAYDTSDDQQDITRGKGMVDTVFQAPQDSGTHYAVMSSYEYISTG 119
Query: 532 LREYNLDNTMDGLYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELV 711
LR+YNLDNTMDG YIAPAFMDKLVVHI+KNF+TLPNIKVPLILGIWGGKGQGKSFQ ELV
Sbjct: 120 LRQYNLDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQAELV 179
Query: 712 FAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMG 891
FAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+DII+KGKMCCLFINDLDAGAGRMG
Sbjct: 180 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMG 239
Query: 892 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 1071
GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 240 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDG 299
Query: 1072 RMEKFYWAPTRDDRVGVCKGIFRSDNVPDDDIVTLVDTFPGQSIDFFGALRARVYDDEVR 1251
RMEKFYWAPTR+DR+GVCKGIFR DNVP++D+V +VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 300 RMEKFYWAPTREDRIGVCKGIFRHDNVPEEDVVKIVDTFPGQSIDFFGALRARVYDDEVR 359
Query: 1252 KWISGVGVDSVGKKLVNSKEGPPTFEQPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLS 1431
KWI+GVG++++GKKLVNSKEGPPTF+QPKM+L+KLLEYGNMLVQEQENVKRVQLADKYL
Sbjct: 360 KWIAGVGIETIGKKLVNSKEGPPTFDQPKMSLEKLLEYGNMLVQEQENVKRVQLADKYLE 419
Query: 1432 EAALGDANEDAIKRGAF 1482
AALGDAN+DAIK G+F
Sbjct: 420 GAALGDANQDAIKSGSF 436
Score = 48.9 bits (115), Expect(2) = 0.0
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 1539 VPEGCIDPNASNFDPTTRSCDGTCV 1613
+PEGC DPNA NFDPT RS DGTC+
Sbjct: 448 IPEGCTDPNAKNFDPTARSDDGTCL 472