BLASTX nr result

ID: Glycyrrhiza23_contig00000118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000118
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547348.1| PREDICTED: 30S ribosomal protein S1, chlorop...    72   5e-11
ref|XP_003534804.1| PREDICTED: 30S ribosomal protein S1, chlorop...    71   8e-11
gb|AFK33906.1| unknown [Medicago truncatula]                           70   1e-10
ref|XP_003594656.1| hypothetical protein MTR_2g033020 [Medicago ...    70   1e-10
ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...    64   1e-08

>ref|XP_003547348.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Glycine
           max]
          Length = 399

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 177 WRLTMTQKQQQRRRHVGVVCSVALQNAKNKERMKLKELFEEAYERCR 317
           W    T KQQQRRR V VVCS+A++NA+NKER KLK+LFEEAYERCR
Sbjct: 10  WGWRPTPKQQQRRRMVPVVCSIAIKNAQNKERAKLKKLFEEAYERCR 56


>ref|XP_003534804.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Glycine
           max]
          Length = 402

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = +3

Query: 177 WRLTMTQKQQQRRRHVGVVCSVALQNAKNKERMKLKELFEEAYERCR 317
           WR T  Q QQQRRR V VVCS+A++NAKNKER KLK+LF+EAYERCR
Sbjct: 14  WRPTPNQ-QQQRRRMVPVVCSIAIENAKNKERAKLKKLFDEAYERCR 59


>gb|AFK33906.1| unknown [Medicago truncatula]
          Length = 409

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +3

Query: 111 MACMAQQLSGVTVRWSPLLPIPWRLTMTQKQQQRRRHVGVVCSVALQNAKNKERMKLKEL 290
           MA +AQQL+  + +WSPLL  P   T TQ  +QRR   G+VCS+A+ +A NKER KLKEL
Sbjct: 3   MASVAQQLT--STKWSPLLCKP---TTTQTHKQRRP--GIVCSIAISSANNKERAKLKEL 55

Query: 291 FEEAYERCR 317
           F  AYERCR
Sbjct: 56  FYNAYERCR 64


>ref|XP_003594656.1| hypothetical protein MTR_2g033020 [Medicago truncatula]
           gi|355483704|gb|AES64907.1| hypothetical protein
           MTR_2g033020 [Medicago truncatula]
          Length = 407

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = +3

Query: 111 MACMAQQLSGVTVRWSPLLPIPWRLTMTQKQQQRRRHVGVVCSVALQNAKNKERMKLKEL 290
           MA +AQQL+  + +WSPLL  P   T TQ  +QRR   G+VCS+A+ +A NKER KLKEL
Sbjct: 1   MASVAQQLT--STKWSPLLCKP---TTTQTHKQRRP--GIVCSIAISSANNKERAKLKEL 53

Query: 291 FEEAYERCR 317
           F  AYERCR
Sbjct: 54  FYNAYERCR 62


>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
           gi|296083203|emb|CBI22839.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/69 (47%), Positives = 46/69 (66%)
 Frame = +3

Query: 111 MACMAQQLSGVTVRWSPLLPIPWRLTMTQKQQQRRRHVGVVCSVALQNAKNKERMKLKEL 290
           MAC+AQQ +G+  R  P+         + KQ Q+   V +V +VA+ NA+ KER+KLKE+
Sbjct: 1   MACLAQQFTGL--RCPPISSSRLSKPFSPKQPQKPSFVRIVSAVAISNAQTKERLKLKEM 58

Query: 291 FEEAYERCR 317
           FE+AYERCR
Sbjct: 59  FEDAYERCR 67


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