BLASTX nr result

ID: Glycyrrhiza23_contig00000104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000104
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R...   492   e-136
ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 2...   491   e-136
ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloropl...   489   e-136
ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 2...   488   e-135
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R...   488   e-135

>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 265

 Score =  492 bits (1266), Expect = e-136
 Identities = 233/250 (93%), Positives = 244/250 (97%), Gaps = 1/250 (0%)
 Frame = -1

Query: 1228 GQVIKLAPSSQHL-GHGRVTMRKAAAKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 1052
            G+ +KL+PS+  L G+GRV+MRK AAK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 15   GKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 74

Query: 1051 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 872
            GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 75   GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 134

Query: 871  SQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAIEGYRIAGGPLGEVTDPLYPGGSF 692
            SQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YPGGSF
Sbjct: 135  SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSF 194

Query: 691  DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNA 512
            DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNA
Sbjct: 195  DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254

Query: 511  WAYATNFVPG 482
            WAYATNFVPG
Sbjct: 255  WAYATNFVPG 264


>ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic isoform
            1 [Glycine max] gi|356559641|ref|XP_003548107.1|
            PREDICTED: chlorophyll a-b binding protein 21,
            chloroplastic isoform 2 [Glycine max]
            gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll
            a-b binding protein 21, chloroplastic isoform 3 [Glycine
            max]
          Length = 264

 Score =  491 bits (1263), Expect = e-136
 Identities = 235/249 (94%), Positives = 241/249 (96%)
 Frame = -1

Query: 1228 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 1049
            GQ IKLAPS+  LG GRV+MRK A+KTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15   GQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 1048 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 869
            DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGS
Sbjct: 75   DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 134

Query: 868  QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAIEGYRIAGGPLGEVTDPLYPGGSFD 689
            QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGA+EGYRIAGGPLGEVTDP+YPGGSFD
Sbjct: 135  QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFD 194

Query: 688  PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNAW 509
            PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAW
Sbjct: 195  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254

Query: 508  AYATNFVPG 482
            AYATNFVPG
Sbjct: 255  AYATNFVPG 263


>ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine max]
            gi|506629|gb|AAA50172.1| photosystem II type I
            chlorophyll a/b-binding protein [Glycine max]
            gi|255636158|gb|ACU18421.1| unknown [Glycine max]
          Length = 264

 Score =  489 bits (1260), Expect = e-136
 Identities = 234/249 (93%), Positives = 241/249 (96%)
 Frame = -1

Query: 1228 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 1049
            GQ IKLAPS+  LG GRV+MRK A+KTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15   GQAIKLAPSTPELGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 1048 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 869
            DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Sbjct: 75   DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS 134

Query: 868  QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAIEGYRIAGGPLGEVTDPLYPGGSFD 689
            QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGA+EGYRIAGGPLGEVTDP+YPGGSFD
Sbjct: 135  QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFD 194

Query: 688  PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNAW 509
            PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAW
Sbjct: 195  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254

Query: 508  AYATNFVPG 482
            AYATNFVPG
Sbjct: 255  AYATNFVPG 263


>ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
            [Glycine max]
          Length = 264

 Score =  488 bits (1257), Expect = e-135
 Identities = 233/249 (93%), Positives = 241/249 (96%)
 Frame = -1

Query: 1228 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 1049
            GQ IKLAPS+  LG GRV+MRK A+KTV+SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15   GQAIKLAPSTPQLGVGRVSMRKTASKTVTSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 1048 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 869
            DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Sbjct: 75   DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS 134

Query: 868  QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAIEGYRIAGGPLGEVTDPLYPGGSFD 689
            QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGA+EGYRIAGGPLGEVTDP+YPGGSFD
Sbjct: 135  QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFD 194

Query: 688  PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNAW 509
            PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAW
Sbjct: 195  PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254

Query: 508  AYATNFVPG 482
            AYATNFVPG
Sbjct: 255  AYATNFVPG 263


>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 265

 Score =  488 bits (1255), Expect = e-135
 Identities = 232/250 (92%), Positives = 242/250 (96%), Gaps = 1/250 (0%)
 Frame = -1

Query: 1228 GQVIKLAPSSQHL-GHGRVTMRKAAAKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 1052
            G+ +KL+PS+  L G+GRV+MRK AAK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 15   GKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 74

Query: 1051 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 872
            GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 75   GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 134

Query: 871  SQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAIEGYRIAGGPLGEVTDPLYPGGSF 692
            SQIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGA+EGYR+AGGPLGEVTDP+YPGGSF
Sbjct: 135  SQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSF 194

Query: 691  DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLVDPVNNNA 512
            DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNA
Sbjct: 195  DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254

Query: 511  WAYATNFVPG 482
            WAYATNFVPG
Sbjct: 255  WAYATNFVPG 264


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