BLASTX nr result

ID: Glycyrrhiza23_contig00000092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000092
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R...   318   6e-85
ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 2...   317   1e-84
ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloropl...   316   2e-84
ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 2...   314   7e-84
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R...   313   1e-83

>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  318 bits (814), Expect = 6e-85
 Identities = 150/162 (92%), Positives = 159/162 (98%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 GKAIKLAPSSQDL-GLGRVTMRKTAAKTISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 309
           GKA+KL+PS+ +L G GRV+MRKTAAK++SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 15  GKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 74

Query: 308 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 129
           GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 134

Query: 128 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 3
           SQIFSEGGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 135 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRV 176


>ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
           isoform 1 [Glycine max] gi|356559641|ref|XP_003548107.1|
           PREDICTED: chlorophyll a-b binding protein 21,
           chloroplastic isoform 2 [Glycine max]
           gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll
           a-b binding protein 21, chloroplastic isoform 3 [Glycine
           max]
          Length = 264

 Score =  317 bits (811), Expect = 1e-84
 Identities = 151/161 (93%), Positives = 157/161 (97%)
 Frame = -1

Query: 485 GKAIKLAPSSQDLGLGRVTMRKTAAKTISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 306
           G+AIKLAPS+  LG+GRV+MRKTA+KT+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15  GQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 305 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 126
           DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGS
Sbjct: 75  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 134

Query: 125 QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 3
           QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYRI
Sbjct: 135 QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRI 175


>ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
           max] gi|506629|gb|AAA50172.1| photosystem II type I
           chlorophyll a/b-binding protein [Glycine max]
           gi|255636158|gb|ACU18421.1| unknown [Glycine max]
          Length = 264

 Score =  316 bits (810), Expect = 2e-84
 Identities = 150/161 (93%), Positives = 158/161 (98%)
 Frame = -1

Query: 485 GKAIKLAPSSQDLGLGRVTMRKTAAKTISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 306
           G+AIKLAPS+ +LG+GRV+MRKTA+KT+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15  GQAIKLAPSTPELGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 305 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 126
           DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Sbjct: 75  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS 134

Query: 125 QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 3
           QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYRI
Sbjct: 135 QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRI 175


>ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
           [Glycine max]
          Length = 264

 Score =  314 bits (805), Expect = 7e-84
 Identities = 149/161 (92%), Positives = 157/161 (97%)
 Frame = -1

Query: 485 GKAIKLAPSSQDLGLGRVTMRKTAAKTISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 306
           G+AIKLAPS+  LG+GRV+MRKTA+KT++SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG
Sbjct: 15  GQAIKLAPSTPQLGVGRVSMRKTASKTVTSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 305 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 126
           DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Sbjct: 75  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS 134

Query: 125 QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 3
           QIFSEGGLDYLGNPSLIHAQSILAIWA QVILMGAVEGYRI
Sbjct: 135 QIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRI 175


>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  313 bits (803), Expect = 1e-83
 Identities = 149/162 (91%), Positives = 157/162 (96%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 GKAIKLAPSSQDL-GLGRVTMRKTAAKTISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 309
           GKA+KL+PS+ +L G GRV+MRKTAAK +SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP
Sbjct: 15  GKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 74

Query: 308 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 129
           GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 134

Query: 128 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 3
           SQIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYR+
Sbjct: 135 SQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRV 176


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