BLASTX nr result

ID: Glycyrrhiza23_contig00000076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000076
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...   305   5e-81
gb|AFK34824.1| unknown [Medicago truncatula]                          304   8e-81
ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex ...   262   4e-68
emb|CBI33274.3| unnamed protein product [Vitis vinifera]              262   4e-68
ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...   260   1e-67

>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
           max]
          Length = 435

 Score =  305 bits (781), Expect = 5e-81
 Identities = 137/159 (86%), Positives = 149/159 (93%)
 Frame = -2

Query: 655 LRNSKEEAQKKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGY 476
           LR+SKEEAQKKWEYII GELQ+KQKAIMGE S S LPHF S+EMHKIRFCDLSF+LGAGY
Sbjct: 277 LRDSKEEAQKKWEYIITGELQKKQKAIMGEKSASQLPHFRSIEMHKIRFCDLSFQLGAGY 336

Query: 475 LYCHQGDCSHTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDD 296
           LYCHQGDC+HTLVIRDMRLIHP+DVHNRAVYP++TFQLK+RFQKC VCKIFRATKVTVDD
Sbjct: 337 LYCHQGDCTHTLVIRDMRLIHPEDVHNRAVYPIITFQLKLRFQKCNVCKIFRATKVTVDD 396

Query: 295 KWTPENPCYFCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 179
           KWTPENPCYFCD+CFSLLH   DG+ LYTDF+EYDYNHD
Sbjct: 397 KWTPENPCYFCDECFSLLHQADDGTLLYTDFVEYDYNHD 435


>gb|AFK34824.1| unknown [Medicago truncatula]
          Length = 447

 Score =  304 bits (779), Expect = 8e-81
 Identities = 140/160 (87%), Positives = 149/160 (93%), Gaps = 1/160 (0%)
 Frame = -2

Query: 655 LRNSKEEAQKKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGY 476
           L+NSKEEAQKKWEYIINGELQQKQKAI+GEASVSHLP F S EMHKI FCDL FRLGAGY
Sbjct: 288 LQNSKEEAQKKWEYIINGELQQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGY 347

Query: 475 LYCHQGDCSHTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDD 296
           LYCHQGDC+HTLVIRDMRLIH DDV N AVYP+VTFQLK+RFQKCGVCKIFRATKVTVDD
Sbjct: 348 LYCHQGDCTHTLVIRDMRLIHADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDD 407

Query: 295 KWTPENPCYFCDDCFSLLHLDVD-GSPLYTDFLEYDYNHD 179
           KWTP+NPCYFCD+CFSLLHL  D GSP+YTDF+EYDYNHD
Sbjct: 408 KWTPDNPCYFCDECFSLLHLAEDGGSPMYTDFIEYDYNHD 447


>ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex subunit 3-like, partial
           [Vitis vinifera]
          Length = 315

 Score =  262 bits (670), Expect = 4e-68
 Identities = 114/159 (71%), Positives = 137/159 (86%)
 Frame = -2

Query: 655 LRNSKEEAQKKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGY 476
           LRNSK++A +KWE II+G+LQQKQKA++G+ ++SHLPHF +V+MHK RFCDL FRLGAGY
Sbjct: 157 LRNSKDDALEKWECIISGDLQQKQKALLGDPTISHLPHFKAVDMHKTRFCDLQFRLGAGY 216

Query: 475 LYCHQGDCSHTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDD 296
           LYCHQGDC HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDD
Sbjct: 217 LYCHQGDCRHTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDD 276

Query: 295 KWTPENPCYFCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 179
           KW PENPCYFCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 277 KWAPENPCYFCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 315


>emb|CBI33274.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  262 bits (670), Expect = 4e-68
 Identities = 114/159 (71%), Positives = 137/159 (86%)
 Frame = -2

Query: 655 LRNSKEEAQKKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGY 476
           LRNSK++A +KWE II+G+LQQKQKA++G+ ++SHLPHF +V+MHK RFCDL FRLGAGY
Sbjct: 87  LRNSKDDALEKWECIISGDLQQKQKALLGDPTISHLPHFKAVDMHKTRFCDLQFRLGAGY 146

Query: 475 LYCHQGDCSHTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDD 296
           LYCHQGDC HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDD
Sbjct: 147 LYCHQGDCRHTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDD 206

Query: 295 KWTPENPCYFCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 179
           KW PENPCYFCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 207 KWAPENPCYFCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 245


>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score =  260 bits (665), Expect = 1e-67
 Identities = 114/159 (71%), Positives = 136/159 (85%)
 Frame = -2

Query: 655 LRNSKEEAQKKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGY 476
           LRNSK++A +KWE II+GELQQKQKA++G+ ++S LPHF +V+MHK RFCDL FRLGAGY
Sbjct: 285 LRNSKDDALEKWECIISGELQQKQKALLGDPTISRLPHFKAVDMHKTRFCDLQFRLGAGY 344

Query: 475 LYCHQGDCSHTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDD 296
           LYCHQGDC HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDD
Sbjct: 345 LYCHQGDCRHTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDD 404

Query: 295 KWTPENPCYFCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 179
           KW PENPCYFCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 405 KWAPENPCYFCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 443


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