BLASTX nr result
ID: Glycyrrhiza23_contig00000046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00000046 (539 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago tr... 118 6e-25 ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R... 107 9e-22 ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] g... 101 6e-20 ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [S... 101 6e-20 gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays] 101 6e-20 >ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago truncatula] gi|355491416|gb|AES72619.1| 60S acidic ribosomal protein P1 [Medicago truncatula] gi|388507442|gb|AFK41787.1| unknown [Medicago truncatula] Length = 110 Score = 118 bits (295), Expect = 6e-25 Identities = 68/110 (61%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = -3 Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307 MSSGELGCIYATLILHDDGIPITAEKI TLLKAANV+VESYWP LFAKLAQ++NVDDLVL Sbjct: 1 MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVL 60 Query: 306 N-XXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160 N A ESDD+MGFSLFD Sbjct: 61 NSGAVGGAAVAVSAPAAGGGTAAAAEPAAVEKKEEAKEESDDDMGFSLFD 110 >ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis] gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein P1, putative [Ricinus communis] Length = 110 Score = 107 bits (268), Expect = 9e-22 Identities = 58/110 (52%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = -3 Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307 M++GEL C YATLILHDDGIP+T+EKIATL+KAANV+VESYWP LFAKLA+ +N+DDLV+ Sbjct: 1 MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60 Query: 306 N-XXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160 N ESDD+MGFSLFD Sbjct: 61 NVGSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110 >ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] gi|2431769|gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays] gi|195619428|gb|ACG31544.1| 60S acidic ribosomal protein P1 [Zea mays] gi|238014308|gb|ACR38189.1| unknown [Zea mays] gi|413941692|gb|AFW74341.1| acidic ribosomal protein P1a [Zea mays] Length = 109 Score = 101 bits (252), Expect = 6e-20 Identities = 55/109 (50%), Positives = 64/109 (58%) Frame = -3 Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307 M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60 Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160 + ESDD+MGFSLFD Sbjct: 61 SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109 >ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor] gi|241940116|gb|EES13261.1| hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor] Length = 109 Score = 101 bits (252), Expect = 6e-20 Identities = 56/109 (51%), Positives = 65/109 (59%) Frame = -3 Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307 M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60 Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160 + A ESDD+MGFSLFD Sbjct: 61 SVGSGGGAAPVAAAAPAGGAAAAAAPAAEEKKEEVKEESDDDMGFSLFD 109 >gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays] Length = 109 Score = 101 bits (252), Expect = 6e-20 Identities = 56/109 (51%), Positives = 65/109 (59%) Frame = -3 Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307 M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60 Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160 + ESDD+MGFSLFD Sbjct: 61 SVGSGGGAAPVAAAAPAVXAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109