BLASTX nr result

ID: Glycyrrhiza23_contig00000046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000046
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago tr...   118   6e-25
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   107   9e-22
ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] g...   101   6e-20
ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [S...   101   6e-20
gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays]             101   6e-20

>ref|XP_003602368.1| 60S acidic ribosomal protein P1 [Medicago truncatula]
           gi|355491416|gb|AES72619.1| 60S acidic ribosomal protein
           P1 [Medicago truncatula] gi|388507442|gb|AFK41787.1|
           unknown [Medicago truncatula]
          Length = 110

 Score =  118 bits (295), Expect = 6e-25
 Identities = 68/110 (61%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = -3

Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307
           MSSGELGCIYATLILHDDGIPITAEKI TLLKAANV+VESYWP LFAKLAQ++NVDDLVL
Sbjct: 1   MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVL 60

Query: 306 N-XXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160
           N                           A         ESDD+MGFSLFD
Sbjct: 61  NSGAVGGAAVAVSAPAAGGGTAAAAEPAAVEKKEEAKEESDDDMGFSLFD 110


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  107 bits (268), Expect = 9e-22
 Identities = 58/110 (52%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
 Frame = -3

Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307
           M++GEL C YATLILHDDGIP+T+EKIATL+KAANV+VESYWP LFAKLA+ +N+DDLV+
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 306 N-XXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160
           N                                     ESDD+MGFSLFD
Sbjct: 61  NVGSGGGAAPVAVSAPAAGAGAAAAAPAVEEKKEEPKEESDDDMGFSLFD 110


>ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays]
           gi|2431769|gb|AAB71079.1| acidic ribosomal protein P1a
           [Zea mays] gi|195619428|gb|ACG31544.1| 60S acidic
           ribosomal protein P1 [Zea mays]
           gi|238014308|gb|ACR38189.1| unknown [Zea mays]
           gi|413941692|gb|AFW74341.1| acidic ribosomal protein P1a
           [Zea mays]
          Length = 109

 Score =  101 bits (252), Expect = 6e-20
 Identities = 55/109 (50%), Positives = 64/109 (58%)
 Frame = -3

Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307
           M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160
           +                                    ESDD+MGFSLFD
Sbjct: 61  SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109


>ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor]
           gi|241940116|gb|EES13261.1| hypothetical protein
           SORBIDRAFT_07g001570 [Sorghum bicolor]
          Length = 109

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/109 (51%), Positives = 65/109 (59%)
 Frame = -3

Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307
           M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160
           +                          A         ESDD+MGFSLFD
Sbjct: 61  SVGSGGGAAPVAAAAPAGGAAAAAAPAAEEKKEEVKEESDDDMGFSLFD 109


>gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays]
          Length = 109

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/109 (51%), Positives = 65/109 (59%)
 Frame = -3

Query: 486 MSSGELGCIYATLILHDDGIPITAEKIATLLKAANVSVESYWPGLFAKLAQNRNVDDLVL 307
           M+SGEL C YA LIL DDGI ITAEKIAT++KAAN+ VESYWP LFAKL + RNV+DL+L
Sbjct: 1   MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 306 NXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXESDDEMGFSLFD 160
           +                                    ESDD+MGFSLFD
Sbjct: 61  SVGSGGGAAPVAAAAPAVXAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109


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