BLASTX nr result

ID: Glycyrrhiza23_contig00000042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00000042
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplasti...   550   e-154
ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplasti...   492   e-137
ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricin...   471   e-130
ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like pr...   456   e-126
ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplasti...   452   e-124

>ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Glycine max]
          Length = 354

 Score =  550 bits (1418), Expect = e-154
 Identities = 303/358 (84%), Positives = 314/358 (87%), Gaps = 3/358 (0%)
 Frame = +3

Query: 189  MKGLGPHTPLLVSKGKPPRLLAVVDALPCCS-HFSRTTTLLSPPLRRCRQKSRLSLAHGT 365
            MKGLGPH PL VS+GK P  LAVVDALP CS +FSRTT L   PLR CRQKSRLSLA GT
Sbjct: 1    MKGLGPHAPL-VSRGKLPPSLAVVDALPTCSSYFSRTTVLY--PLR-CRQKSRLSLARGT 56

Query: 366  IRAQASNVS-VGPGDYGSNNEKDGQNVFERNP-DGDSSSKIDKPNRIPYPISIALVLFGC 539
            IRAQASN+S V PGDYGSN EKDGQNVFE N  +G SS+ +  P+RIPYP+SIA VL GC
Sbjct: 57   IRAQASNISGVEPGDYGSNTEKDGQNVFEGNVIEGSSSNVVKPPDRIPYPLSIAFVLLGC 116

Query: 540  ALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLL 719
            ALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLL
Sbjct: 117  ALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLL 176

Query: 720  GSTGALALMSILSVVISRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPSDV 899
            GS GALALMSILSVVI RIFQSVPAQFQTTLPIGEYAAVTLLLFFGLK+IKDAWDLPSDV
Sbjct: 177  GSMGALALMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPSDV 236

Query: 900  VKNGDNSSPELDXXXXXXXXXXXXXSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALA 1079
            VK GDNSSPELD             S RLSNPLEI+WKSFSLVFFAEWGDRSMLATIAL 
Sbjct: 237  VK-GDNSSPELDELAEAEELVKEKVSTRLSNPLEIVWKSFSLVFFAEWGDRSMLATIALG 295

Query: 1080 AAQSPWGVASGAIAGHLLATSIAILGGAFLANYISEKLVGYLGGGLFLIFAVATFCGV 1253
            AAQSPWGVASGAIAGHLLAT+IAILGGAFLANYISEKLVGYLGGGLFLIFAVATF GV
Sbjct: 296  AAQSPWGVASGAIAGHLLATTIAILGGAFLANYISEKLVGYLGGGLFLIFAVATFFGV 353


>ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplastic [Vitis vinifera]
            gi|297741903|emb|CBI33338.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  492 bits (1267), Expect = e-137
 Identities = 263/346 (76%), Positives = 283/346 (81%), Gaps = 1/346 (0%)
 Frame = +3

Query: 219  LVSKGKPPRLLAVVDALPCCSHFSRTTTLLSPPLRRCRQKSRLSLAHGTIRAQASNVSVG 398
            +VS+ K P LLA+VD+ PCC+  SR T    P   RCR  SRL    GTIRAQASNV +G
Sbjct: 12   IVSRRKLP-LLALVDSFPCCAILSRRTI---PSSLRCRDVSRLKSVCGTIRAQASNVGIG 67

Query: 399  PGDYGSNNEKDGQNVFERNPDGDSSSKIDKP-NRIPYPISIALVLFGCALVFSLIAFVKG 575
             G Y    E D Q +F   P  DSSS I+KP +RIPYP+SIA+VLFGCALVFSLI F KG
Sbjct: 68   SGGYEGKGENDNQKIFVNGPPSDSSSNIEKPPDRIPYPLSIAIVLFGCALVFSLIIFTKG 127

Query: 576  GPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSTGALALMSIL 755
            GPSS+LAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEK LVLLGS GAL+LM+IL
Sbjct: 128  GPSSLLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMGALSLMTIL 187

Query: 756  SVVISRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPSDVVKNGDNSSPELD 935
            SVVI RIF SVPAQFQTTLPIGEYAAVTLL+FFGLKSIKDAWDLPS VVK+GD S PELD
Sbjct: 188  SVVIGRIFHSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSIVVKSGDKSGPELD 247

Query: 936  XXXXXXXXXXXXXSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAAQSPWGVASGA 1115
                         SKRL+NPLEI+WKSFSLVFFAEWGDRSMLATIAL AAQSPWGVASGA
Sbjct: 248  EFVEAEELVKEKVSKRLTNPLEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGA 307

Query: 1116 IAGHLLATSIAILGGAFLANYISEKLVGYLGGGLFLIFAVATFCGV 1253
            IAGHL AT+IAILGGAFLANYISEKLVGYLGG LFL+FAVATF GV
Sbjct: 308  IAGHLFATTIAILGGAFLANYISEKLVGYLGGALFLVFAVATFFGV 353


>ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricinus communis]
            gi|223542760|gb|EEF44297.1| Transmembrane protein TPARL,
            putative [Ricinus communis]
          Length = 351

 Score =  471 bits (1213), Expect = e-130
 Identities = 252/356 (70%), Positives = 285/356 (80%), Gaps = 1/356 (0%)
 Frame = +3

Query: 189  MKGLGPHTPLLVSKGKPPRLLAVVDALPCCSHFSRTTTLLSPPLRRCRQKSRLSLAHGTI 368
            M+GL       +S+GKPP LLA+VD+LPC +  S  T  +S  LR    + RL      +
Sbjct: 1    MQGLSLQRTPFISRGKPP-LLALVDSLPCLAPIS--TRPISTSLR---YRERLISDFSIL 54

Query: 369  RAQASNVSVGPGDYGSNNEKDGQNVFERNPDGDSSSKI-DKPNRIPYPISIALVLFGCAL 545
            R QASNVS+G G Y    EKD Q      P  D+SS+I + P++IPYP+SIA+VL GCA 
Sbjct: 55   RPQASNVSIGSGGYEGGEEKDNQKNLVNGPPSDNSSEIVEPPSKIPYPLSIAVVLLGCAF 114

Query: 546  VFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGS 725
            +FSLIAFVKGGPSS+LAAI+KSG TAAFTLIFVSEIGDKTFFIAALLAMQY+KGLVLLGS
Sbjct: 115  IFSLIAFVKGGPSSILAAISKSGLTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGS 174

Query: 726  TGALALMSILSVVISRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPSDVVK 905
             GAL+LM+ILSV+I RIF SVPAQFQTTLPIGEYAAVTLL+FFGLKSIKDAWDLPSD V+
Sbjct: 175  MGALSLMTILSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSDEVR 234

Query: 906  NGDNSSPELDXXXXXXXXXXXXXSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIALAAA 1085
            NGD +SPELD             SK+L+NP EIIWKSFSLVFFAEWGDRSMLATIAL AA
Sbjct: 235  NGDKNSPELDEYAEAEELVKEKVSKKLTNPFEIIWKSFSLVFFAEWGDRSMLATIALGAA 294

Query: 1086 QSPWGVASGAIAGHLLATSIAILGGAFLANYISEKLVGYLGGGLFLIFAVATFCGV 1253
            QSPWGVA+GAIAGHL+ATSIAILGGAFLANYISEKLVGYLGG LFL+FA+ATF GV
Sbjct: 295  QSPWGVATGAIAGHLIATSIAILGGAFLANYISEKLVGYLGGVLFLVFAIATFFGV 350


>ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 2,
            chloroplastic-like [Cucumis sativus]
          Length = 355

 Score =  456 bits (1174), Expect = e-126
 Identities = 248/359 (69%), Positives = 280/359 (77%), Gaps = 4/359 (1%)
 Frame = +3

Query: 189  MKGLGPHTPLLVSKGKPPRLLAVVDALPCCSH----FSRTTTLLSPPLRRCRQKSRLSLA 356
            M+GL   +P  VS GK      ++D+LP CS     FSRT   +S  L+  R+ +RLS  
Sbjct: 1    MEGLVVRSPF-VSTGKKLPFSPLLDSLPSCSASGGVFSRT---VSTSLKH-RRVTRLSRT 55

Query: 357  HGTIRAQASNVSVGPGDYGSNNEKDGQNVFERNPDGDSSSKIDKPNRIPYPISIALVLFG 536
            +G  RA +SNVS+G   Y    EK+G +V   +    SSSK   P+ +PYP+SIALVL G
Sbjct: 56   YGKSRAHSSNVSIGSDGYKHEEEKEGHHVISGSASDISSSKTXSPSGLPYPLSIALVLIG 115

Query: 537  CALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVL 716
            C LVFSLIAFVKGGPSS+LAA+AKSGFTAAF+LIF+SEIGDKTFFIAALLAMQYEKGLVL
Sbjct: 116  CGLVFSLIAFVKGGPSSILAAVAKSGFTAAFSLIFISEIGDKTFFIAALLAMQYEKGLVL 175

Query: 717  LGSTGALALMSILSVVISRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPSD 896
            LGS GAL+LM++LSV+I RIF SVPAQFQTTLPIGEYAAVTLLLFFGLK+IKDAWDLPS 
Sbjct: 176  LGSMGALSLMTVLSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPSS 235

Query: 897  VVKNGDNSSPELDXXXXXXXXXXXXXSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIAL 1076
            V K GD S PELD             SKRLSNPLEIIWKSFSL+FFAEWGDRSMLATIAL
Sbjct: 236  VHKQGDESGPELDEYVEAEELVKEKVSKRLSNPLEIIWKSFSLIFFAEWGDRSMLATIAL 295

Query: 1077 AAAQSPWGVASGAIAGHLLATSIAILGGAFLANYISEKLVGYLGGGLFLIFAVATFCGV 1253
             AAQSPWGVA+GAI GHL+AT+IAILGGA LA YISEKLVGYLGG LFLIFA+ATF GV
Sbjct: 296  GAAQSPWGVATGAITGHLIATTIAILGGALLAKYISEKLVGYLGGVLFLIFAIATFFGV 354


>ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Cucumis sativus]
          Length = 370

 Score =  452 bits (1162), Expect = e-124
 Identities = 247/357 (69%), Positives = 280/357 (78%), Gaps = 5/357 (1%)
 Frame = +3

Query: 189  MKGLGPHTPLLVSKGKPPRLLAVVDALPCCSH----FSRTTTLLSPPLRRCRQKSRLSLA 356
            M+GL   +P  VS GK      ++D+LP CS     FSRT   +S  L+  R+ +RLS  
Sbjct: 1    MEGLVVRSPF-VSTGKKLPFSPLLDSLPSCSASGGVFSRT---VSTSLKH-RRVTRLSRT 55

Query: 357  HGTIRAQASNVSVGPGDYGSNNEKDGQNVFERNPDGDSSSKIDK-PNRIPYPISIALVLF 533
            +G  RA +SNVS+G   Y    EK+G +V   +    SSSK +K P+ +PYP+SIALVL 
Sbjct: 56   YGKSRAHSSNVSIGSDGYKHEEEKEGHHVISGSASDISSSKTEKSPSGLPYPLSIALVLI 115

Query: 534  GCALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLV 713
            GC LVFSLIAFVKGGPSS+LAA+AKSGFTAAF+LIF+SEIGDKTFFIAALLAMQYEKGLV
Sbjct: 116  GCGLVFSLIAFVKGGPSSILAAVAKSGFTAAFSLIFISEIGDKTFFIAALLAMQYEKGLV 175

Query: 714  LLGSTGALALMSILSVVISRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWDLPS 893
            LLGS GAL+LM++LSV+I RIF SVPAQFQTTLPIGEYAAVTLLLFFGLK+IKDAWDLPS
Sbjct: 176  LLGSMGALSLMTVLSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPS 235

Query: 894  DVVKNGDNSSPELDXXXXXXXXXXXXXSKRLSNPLEIIWKSFSLVFFAEWGDRSMLATIA 1073
             V K GD S PELD             SKRLSNPLEIIWKSFSL+FFAEWGDRSMLATIA
Sbjct: 236  SVHKQGDESGPELDEYVEAEELVKEKVSKRLSNPLEIIWKSFSLIFFAEWGDRSMLATIA 295

Query: 1074 LAAAQSPWGVASGAIAGHLLATSIAILGGAFLANYISEKLVGYLGGGLFLIFAVATF 1244
            L AAQSPWGVA+GAI GHL+AT+IAILGGA LA YISEKLVGYLGG LFLIFA+ATF
Sbjct: 296  LGAAQSPWGVATGAITGHLIATTIAILGGALLAKYISEKLVGYLGGVLFLIFAIATF 352


Top