BLASTX nr result
ID: Glycyrrhiza23_contig00000034
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00000034 (691 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C... 169 1e-71 ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C... 163 5e-70 gb|ACU19827.1| unknown [Glycine max] 160 2e-68 ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R... 156 1e-67 ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [P... 160 5e-67 >ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like [Glycine max] Length = 290 Score = 169 bits (427), Expect(2) = 1e-71 Identities = 82/98 (83%), Positives = 83/98 (84%) Frame = +2 Query: 107 GRVQARFGFGTXXXXXXXXXXXGRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 286 GRVQARFGFG G GS SDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK Sbjct: 25 GRVQARFGFGKKKAAAPKKVSRGSGSSSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 84 Query: 287 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 400 PAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTP Sbjct: 85 PAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTP 122 Score = 127 bits (319), Expect(2) = 1e-71 Identities = 61/61 (100%), Positives = 61/61 (100%) Frame = +1 Query: 508 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 687 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK Sbjct: 154 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 213 Query: 688 R 690 R Sbjct: 214 R 214 >ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like [Glycine max] Length = 290 Score = 163 bits (413), Expect(2) = 5e-70 Identities = 79/98 (80%), Positives = 81/98 (82%) Frame = +2 Query: 107 GRVQARFGFGTXXXXXXXXXXXGRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 286 GRV ARFGFG G G +DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK Sbjct: 25 GRVHARFGFGKKKAPAQKKASRGSGRDTDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 84 Query: 287 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 400 PAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTP Sbjct: 85 PAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTP 122 Score = 127 bits (319), Expect(2) = 5e-70 Identities = 61/61 (100%), Positives = 61/61 (100%) Frame = +1 Query: 508 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 687 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK Sbjct: 154 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 213 Query: 688 R 690 R Sbjct: 214 R 214 >gb|ACU19827.1| unknown [Glycine max] Length = 290 Score = 160 bits (404), Expect(2) = 2e-68 Identities = 78/98 (79%), Positives = 80/98 (81%) Frame = +2 Query: 107 GRVQARFGFGTXXXXXXXXXXXGRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 286 GRV ARFGFG G G + RPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK Sbjct: 25 GRVHARFGFGKKKAPAQKKASRGSGRDTVRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 84 Query: 287 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 400 PAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTP Sbjct: 85 PAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTP 122 Score = 125 bits (315), Expect(2) = 2e-68 Identities = 60/61 (98%), Positives = 60/61 (98%) Frame = +1 Query: 508 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 687 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIE LVIGYIEFQRNAELDPEK Sbjct: 154 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEALVIGYIEFQRNAELDPEK 213 Query: 688 R 690 R Sbjct: 214 R 214 >ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis] gi|223532494|gb|EEF34284.1| chlorophyll A/B binding protein, putative [Ricinus communis] Length = 285 Score = 156 bits (395), Expect(2) = 1e-67 Identities = 79/98 (80%), Positives = 81/98 (82%) Frame = +2 Query: 107 GRVQARFGFGTXXXXXXXXXXXGRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 286 GRVQARFGFGT SDRPLWYPGAKAPE+LDGSLVGDYGFDPFGLGK Sbjct: 26 GRVQARFGFGTKKSAPKRSAKPT----SDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGK 81 Query: 287 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 400 PAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTP Sbjct: 82 PAEYLQFELDSLDQNLAKNIAGDIIGTRTEAADVKSTP 119 Score = 126 bits (316), Expect(2) = 1e-67 Identities = 60/61 (98%), Positives = 61/61 (100%) Frame = +1 Query: 508 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 687 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRN+ELDPEK Sbjct: 151 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEK 210 Query: 688 R 690 R Sbjct: 211 R 211 >ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa] gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa x Populus deltoides] gi|222855110|gb|EEE92657.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa] Length = 285 Score = 160 bits (404), Expect(2) = 5e-67 Identities = 80/98 (81%), Positives = 82/98 (83%) Frame = +2 Query: 107 GRVQARFGFGTXXXXXXXXXXXGRGSGSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 286 GR+QARFGFG + S DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK Sbjct: 26 GRIQARFGFGGKKAPKKSI----KPSTPDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGK 81 Query: 287 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 400 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP Sbjct: 82 PAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTP 119 Score = 120 bits (302), Expect(2) = 5e-67 Identities = 56/61 (91%), Positives = 59/61 (96%) Frame = +1 Query: 508 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEK 687 L+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSIT LIWIE ++IGYIEFQRNAELDPEK Sbjct: 151 LSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEK 210 Query: 688 R 690 R Sbjct: 211 R 211