BLASTX nr result

ID: Gardenia21_contig00049419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00049419
         (262 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP6...    77   7e-12

>ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP62 isoform X2
           [Erythranthe guttatus]
          Length = 823

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 36/86 (41%), Positives = 57/86 (66%)
 Frame = -2

Query: 261 LSKGGIMKSTVMRSLVLQLVAVVVHWPSNHTIKTLGSDELQLLQRQTDDVVAVGFSLEWL 82
           ++KG I+KS   +   LQLV  VV    +HT+ TLG+ E+ ++Q+ TDD   VGF ++WL
Sbjct: 694 ITKGSILKSIEAKKAFLQLVVEVVERLHSHTLDTLGAHEMHVIQKLTDDAATVGFHVDWL 753

Query: 81  QQRLRNISASSKYLECLMHLVNLGQQ 4
           QQR++ I + SKY + LM L ++ ++
Sbjct: 754 QQRIKKIVSISKYRDSLMQLNDISEK 779


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